Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11365 and BWI76_RS11370 are separated by 0 nucleotidesBWI76_RS11370 and BWI76_RS11375 overlap by 4 nucleotidesBWI76_RS11375 and BWI76_RS11380 overlap by 4 nucleotidesBWI76_RS11380 and BWI76_RS11385 are separated by 58 nucleotides BWI76_RS11365: BWI76_RS11365 - iron ABC transporter, at 2,395,381 to 2,396,148 _RS11365 BWI76_RS11370: BWI76_RS11370 - iron-dicitrate transporter subunit FecD, at 2,396,149 to 2,397,102 _RS11370 BWI76_RS11375: BWI76_RS11375 - iron-dicitrate transporter permease subunit, at 2,397,099 to 2,398,097 _RS11375 BWI76_RS11380: BWI76_RS11380 - iron-dicitrate transporter substrate-binding subunit, at 2,398,094 to 2,398,996 _RS11380 BWI76_RS11385: BWI76_RS11385 - TonB-dependent siderophore receptor, at 2,399,055 to 2,401,385 _RS11385
Group Condition BWI76_RS11365 BWI76_RS11370 BWI76_RS11375 BWI76_RS11380 BWI76_RS11385
stress Paraquat dichloride 0.1 mg/ml -1.2 -0.7 -1.1 -0.6 -0.7
phage K. M5a1 KLEB26 MOI 0.1 -0.8 -0.6 -1.1 -0.7 -0.6
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.2 -1.3 -0.7 -0.4 -0.1
phage K. M5a1 KLEB23 MOI 1 -0.5 -1.8 -0.4 -0.2 +0.1
phage K. M5a1 KLEB23 MOI 1 -1.4 -0.1 -0.4 -0.7 +0.2
carbon source Gly-Glu (C) -0.3 -2.2 +0.1 +0.2 -0.0
stress Cobalt chloride 0.5 mM -0.9 -1.3 -0.2 -0.1 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.5 -1.5 -0.4 -0.0 -0.3
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL +0.7 -1.5 -0.8 -0.2 +0.2
phage KLEB1 MOI 10 -1.1 -0.6 +0.1 -0.1 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -2.5 +0.3 +0.5 +0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -0.3 +0.8 +0.3 +0.3
phage KLEB17 MOI 1 +0.7 -1.0 +0.2 +0.0 +0.5
phage KLEB20 MOI 1 -1.0 +0.1 +0.5 +0.4 +0.6
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.3 +0.8 -1.0 +0.7 -0.1
phage KLEB1 MOI 0.1 -0.1 -0.5 +0.5 +0.9 +0.5
rhizosphere rhizosphere sample 1; outgrowth in LB +1.3 +0.2 +0.4 -0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.7 +0.7 +0.8 +0.6
phage K. M5a1 KLEB10 MOI 10 -0.6 +0.5 +0.6 +0.8 +0.3
ecofab LB in EcoFAB_10mL -0.3 -0.1 +1.2 +0.8 -0.0
phage KLEB15 MOI 10 -0.3 +0.8 +0.8 +0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 -0.3 +0.7 +0.3 -0.4
nitrogen source L-tyrosine (N) +0.8 +0.6 +0.4 +0.5 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.2 +0.4 -0.2 -0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.5 -0.4 +0.3 -0.1 +0.8
carbon source 2'-Deoxyinosine 5 mM (C) +1.2 +0.1 +0.2 +0.7 +0.2
nitrogen source Gly-DL-Asp (N) +0.7 +1.7 -0.3 +0.2 +0.3
nitrogen source L-Arginine (N) +0.8 +0.5 +0.6 +0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.5 +0.1 +0.2 +0.0 +0.5
stress Chlorite 2.5 mM +0.6 +0.4 +0.6 +0.5 +2.8
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