Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11320 and BWI76_RS11325 are separated by 20 nucleotidesBWI76_RS11325 and BWI76_RS11330 are separated by 236 nucleotidesBWI76_RS11330 and BWI76_RS11335 are separated by 156 nucleotidesBWI76_RS11335 and BWI76_RS11340 are separated by 5 nucleotides BWI76_RS11320: BWI76_RS11320 - NUDIX hydrolase, at 2,386,433 to 2,386,909 _RS11320 BWI76_RS11325: BWI76_RS11325 - 23S rRNA pseudouridine synthase E, at 2,386,930 to 2,387,580 _RS11325 BWI76_RS11330: BWI76_RS11330 - isocitrate dehydrogenase (NADP(+)), at 2,387,817 to 2,389,067 _RS11330 BWI76_RS11335: BWI76_RS11335 - tautomerase, at 2,389,224 to 2,389,610 _RS11335 BWI76_RS11340: BWI76_RS11340 - carboxymuconolactone decarboxylase, at 2,389,616 to 2,389,918 _RS11340
Group Condition BWI76_RS11320 BWI76_RS11325 BWI76_RS11330 BWI76_RS11335 BWI76_RS11340
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. N.D. N.D. -5.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. N.D. -5.5 N.D.
nitrogen source Thymine (N) N.D. N.D. N.D. -5.2 N.D.
nitrogen source D-Alanine (N) N.D. N.D. N.D. -5.1 N.D.
phage KLEB16 MOI 10 N.D. N.D. N.D. -4.5 N.D.
phage K. M5a1 KLEB10 MOI 10 N.D. N.D. N.D. -4.4 N.D.
phage KLEB17 MOI 1 N.D. N.D. N.D. -4.1 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. N.D. -3.5 N.D.
phage KLEB29 MOI 1 N.D. N.D. N.D. -3.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -3.1 N.D.
nitrogen source L-Asparagine (N) N.D. N.D. N.D. -3.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -2.9 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. N.D. -2.4 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. N.D. -2.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. -2.2 N.D.
phage KLEB17 MOI 1 N.D. N.D. N.D. -2.1 N.D.
phage KLEB13 MOI 0.1 N.D. N.D. N.D. -2.0 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. N.D. -2.0 N.D.
stress Sisomicin 0.008 mg/ml N.D. N.D. N.D. -2.0 N.D.
carbon source 2'-Deoxycytidine 5 mM (C) N.D. N.D. N.D. -1.9 N.D.
phage K. M5a1 KLEB26 MOI 0.1 N.D. N.D. N.D. -1.8 N.D.
phage KLEB24 MOI 1 N.D. N.D. N.D. -1.8 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. -1.7 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. N.D. N.D. -1.7 N.D.
phage K. M5a1 KLEB23 MOI 10 N.D. N.D. N.D. -1.6 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL N.D. N.D. N.D. +1.7 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. +1.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. N.D. N.D. +1.8 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. N.D. N.D. +1.8 N.D.
phage K. M5a1 KLEB23 MOI 10 N.D. N.D. N.D. +2.1 N.D.
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