Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS11155 and BWI76_RS11160 overlap by 20 nucleotidesBWI76_RS11160 and BWI76_RS11165 are separated by 19 nucleotidesBWI76_RS11165 and BWI76_RS11170 are separated by 36 nucleotidesBWI76_RS11170 and BWI76_RS11175 are separated by 233 nucleotides BWI76_RS11155: BWI76_RS11155 - penicillin-binding protein activator LpoB, at 2,351,383 to 2,352,018 _RS11155 BWI76_RS11160: BWI76_RS11160 - thiamine kinase, at 2,351,999 to 2,352,817 _RS11160 BWI76_RS11165: BWI76_RS11165 - beta-N-acetylhexosaminidase, at 2,352,837 to 2,353,859 _RS11165 BWI76_RS11170: BWI76_RS11170 - hypothetical protein, at 2,353,896 to 2,354,438 _RS11170 BWI76_RS11175: BWI76_RS11175 - NADH dehydrogenase, at 2,354,672 to 2,355,976 _RS11175
Group Condition BWI76_RS11155 BWI76_RS11160 BWI76_RS11165 BWI76_RS11170 BWI76_RS11175
stress Cephalothin 0.16 mg/ml -5.5 N.D. -2.7 -1.0 N.D.
stress Cephalothin 0.16 mg/ml -4.3 N.D. -3.2 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 N.D. -0.1 -4.6 N.D.
r2a control R2A control -5.0 N.D. +0.0 +0.0 N.D.
lb dilute Dilute LB (1/10) -4.7 N.D. +0.1 -0.2 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL -3.4 N.D. +0.2 -1.4 N.D.
lb dilute Dilute LB (1/20) -4.1 N.D. -0.1 -0.3 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.5 N.D. -1.8 -3.1 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -3.9 N.D. -0.4 +0.1 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -3.2 N.D. -0.5 -0.5 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -3.4 N.D. -0.3 -0.5 N.D.
lb dilute Dilute LB (1/10) -3.8 N.D. -0.2 -0.3 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -3.9 N.D. -0.4 +0.2 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.5 N.D. -0.2 -1.4 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -3.6 N.D. +0.0 -0.3 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -3.9 N.D. +0.1 +0.1 N.D.
stress A22 0.1 mg/ml -4.2 N.D. +0.1 +0.4 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.8 N.D. -0.1 -4.3 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL -3.9 N.D. +0.1 +0.1 N.D.
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL -2.5 N.D. +0.5 -1.6 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -3.7 N.D. -0.2 +0.3 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -3.3 N.D. -0.4 +0.4 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -3.8 N.D. -0.2 +0.7 N.D.
r2a control R2A control -3.5 N.D. -0.5 +1.0 N.D.
stress A22 0.1 mg/ml -3.8 N.D. +0.0 +0.9 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -3.5 N.D. -0.1 +0.7 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -4.2 N.D. -0.1 +1.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.4 N.D. -0.3 +1.2 N.D.
carbon source Gly-Glu (C) +3.9 N.D. -0.9 -0.1 N.D.
phage KLEB29 MOI 1 +2.5 N.D. +0.4 +2.7 N.D.
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