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Fitness for 5 genes in
Klebsiella michiganensis M5al
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500 nt
BWI76_RS11085 and BWI76_RS11090 are separated by 12 nucleotides
BWI76_RS11090 and BWI76_RS11095 are separated by 210 nucleotides
BWI76_RS11095 and BWI76_RS11100 are separated by 89 nucleotides
BWI76_RS11100 and BWI76_RS11105 are separated by 143 nucleotides
BWI76_RS11085: BWI76_RS11085 - malonyl CoA-acyl carrier protein transacylase, at 2,338,394 to 2,339,323
_RS11085
BWI76_RS11090: BWI76_RS11090 - beta-ketoacyl-ACP reductase, at 2,339,336 to 2,340,070
_RS11090
BWI76_RS11095: BWI76_RS11095 - acyl carrier protein, at 2,340,281 to 2,340,517
_RS11095
BWI76_RS11100: BWI76_RS11100 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 2,340,607 to 2,341,848
_RS11100
BWI76_RS11105: BWI76_RS11105 - aminodeoxychorismate lyase, at 2,341,992 to 2,342,801
_RS11105
Group
Condition
BWI76
_RS11085
BWI76
_RS11090
BWI76
_RS11095
BWI76
_RS11100
BWI76
_RS11105
nitrogen source
D-Alanine (N)
N.D.
N.D.
N.D.
-0.3
-6.2
supernatant control
Vogels_fungal_media; pH 5.5
N.D.
N.D.
N.D.
-0.4
-3.8
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
N.D.
N.D.
N.D.
-2.6
-1.5
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
N.D.
N.D.
N.D.
-1.4
-2.2
nitrogen source
Thymidine (N)
N.D.
N.D.
N.D.
-0.2
-3.0
stress
Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
N.D.
N.D.
N.D.
-0.5
-2.5
supernatant control
Vogels_fungal_media 0.1X
N.D.
N.D.
N.D.
-0.9
-1.8
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
N.D.
N.D.
N.D.
-0.4
-2.0
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
N.D.
N.D.
N.D.
-1.7
-0.7
phage
KLEB15 MOI 0.1
N.D.
N.D.
N.D.
-0.2
-2.1
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
-0.8
-1.4
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
N.D.
N.D.
N.D.
-1.2
-1.0
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
N.D.
N.D.
N.D.
-1.2
-1.0
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
N.D.
N.D.
N.D.
-0.5
-1.6
supernatant
RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x
N.D.
N.D.
N.D.
-0.5
-1.5
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
N.D.
N.D.
-1.6
-0.4
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
N.D.
N.D.
-1.5
-0.6
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
N.D.
N.D.
N.D.
-1.0
-1.0
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
N.D.
N.D.
-1.2
-0.8
phage
KLEB17 MOI 1
N.D.
N.D.
N.D.
-0.3
-1.6
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
N.D.
N.D.
N.D.
-0.9
-1.0
nitrogen source
Cytosine (N)
N.D.
N.D.
N.D.
-0.3
-1.6
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
N.D.
N.D.
N.D.
-1.9
+0.0
stress
Cobalt chloride 0.5 mM
N.D.
N.D.
N.D.
+0.1
-1.8
phage
KLEB20 MOI 0.1
N.D.
N.D.
N.D.
+0.7
-1.9
stress
nitrite 20 mM
N.D.
N.D.
N.D.
+0.4
-1.5
phage
K. M5a1 KLEB23 MOI 10
N.D.
N.D.
N.D.
+0.7
-1.6
phage
K. M5a1 KLEB22 MOI 10
N.D.
N.D.
N.D.
+0.9
-1.2
stress
Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
N.D.
N.D.
N.D.
-1.1
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
+2.4
-0.4
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