Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS10695 and BWI76_RS10700 are separated by 245 nucleotidesBWI76_RS10700 and BWI76_RS10705 are separated by 25 nucleotidesBWI76_RS10705 and BWI76_RS10710 are separated by 212 nucleotidesBWI76_RS10710 and BWI76_RS10715 are separated by 171 nucleotides BWI76_RS10695: BWI76_RS10695 - aldehyde dehydrogenase PuuC, at 2,260,130 to 2,261,617 _RS10695 BWI76_RS10700: BWI76_RS10700 - XRE family transcriptional regulator, at 2,261,863 to 2,262,420 _RS10700 BWI76_RS10705: BWI76_RS10705 - Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data), at 2,262,446 to 2,263,210 _RS10705 BWI76_RS10710: BWI76_RS10710 - Glutamate--putrescine ligase (EC 6.3.1.11) (from data), at 2,263,423 to 2,264,841 _RS10710 BWI76_RS10715: BWI76_RS10715 - hypothetical protein, at 2,265,013 to 2,265,201 _RS10715
Group Condition BWI76_RS10695 BWI76_RS10700 BWI76_RS10705 BWI76_RS10710 BWI76_RS10715
nitrogen source Putrescine (N) -2.6 -1.8 -4.5 -3.2 N.D.
nitrogen source Putrescine (N) -3.2 -1.0 -3.8 -2.5 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.0 -2.3 -1.3 -2.1 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL -0.1 -2.1 -0.7 -1.3 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.2 -1.5 -0.4 -0.9 N.D.
phage K. M5a1 KLEB22 MOI 10 -0.3 -1.9 -0.5 -0.2 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.2 -1.6 -0.2 -1.3 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL +0.3 -1.6 -0.7 -0.8 N.D.
phage Roth35v2 -0.2 -1.5 -0.3 -0.4 N.D.
carbon source D-Lactate (C) -0.3 -1.4 -0.8 +0.2 N.D.
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -1.3 -0.6 -0.1 N.D.
carbon source Cytidine (C) -0.6 -1.1 -0.7 +0.2 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.4 -1.7 -0.5 -0.4 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL +0.3 -1.2 -0.1 -0.8 N.D.
carbon source D-Lactate (C) -0.1 -1.2 -0.7 +0.6 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL +0.4 -1.3 +0.4 -0.7 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 +0.6 -0.9 -0.1 N.D.
phage K. M5a1 KLEB23 MOI 10 -0.4 +0.8 -1.0 -0.2 N.D.
phage ER37 -0.5 +1.0 -1.0 -0.2 N.D.
stress Nickel (II) chloride 1.5 mM +0.1 -0.6 +0.9 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -1.3 +1.0 -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +1.2 -0.5 -0.7 N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.1 +3.0 -2.5 -0.2 N.D.
ecofab LB in EcoFAB_3.5mL -0.1 +1.3 -0.6 -0.2 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.4 +1.1 -1.0 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.0 -0.5 -0.7 +1.6 N.D.
nitrogen source L-Proline (N) -0.3 +1.3 -0.6 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +1.1 +0.6 -1.0 N.D.
nitrogen source L-Leucine (N) -0.1 +1.9 -0.5 +0.3 N.D.
nitrogen source L-Leucine (N) +0.1 +2.0 -0.4 +0.0 N.D.
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