Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS10605	BWI76_RS10610	BWI76_RS10615	BWI76_RS10620	BWI76_RS10625
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.4	-0.0	-0.2	-0.6	-1.6
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.6	-0.4	-0.6	-0.4	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.6	-0.1	-0.4	-0.6	-1.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.7	-0.3	-0.8	-0.1	-0.7
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.6	-0.5	-0.2	-0.2	-0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.5	-0.4	-0.3	-0.2	-0.9
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.6	-0.5	-0.1	+0.0	-1.2
phage	K. M5a1 KLEB23 MOI 1	-0.2	-0.3	-0.7	-0.4	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.6	-0.3	+0.1	-0.2	-1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.6	-0.4	+0.3	-0.2	-1.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.7	-0.4	+0.2	-0.2	-0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.3	-0.1	+0.3	-0.3	-1.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.1	-0.1	+0.3	-0.2	-0.7
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	-0.7	-0.2	+0.3	-0.1	-1.2
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.6	-0.2	+0.4	-0.0	-1.3
nitrogen source	Glucuronamide (N)	-0.4	-0.7	+0.2	-0.0	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.7	-0.4	+0.4	-0.0	-0.8
nitrogen source	L-Phenylalanine (N)	-0.6	-0.9	+0.6	+0.1	-0.8
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.4	-0.8	+0.3	+0.1	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.7	+0.2	-0.1	+0.2	-1.0
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.7	-0.5	+0.3	+0.5	-0.8
phage	KLEB17 MOI 1	+0.2	-0.9	+0.2	+0.1	-0.9
nitrogen source	D-Alanine (N)	-0.3	+0.2	+0.2	+0.1	-1.4
phage	K. M5a1 KLEB23 MOI 10	-0.5	+0.0	-1.1	-0.2	+0.7
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-0.7	-0.0	+0.5	+0.2	-0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.1	+0.2	+0.7	-0.5	-1.0
nitrogen source	L-tyrosine (N)	-0.2	+0.3	+0.2	+0.4	-1.2
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.7	+0.3	+0.7	+0.4	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.4	+1.4	+0.0	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+1.2	+0.1	+0.6	+0.2