Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS10295	BWI76_RS10300	BWI76_RS10305	BWI76_RS10310	BWI76_RS10315
nitrogen source	L-tyrosine (N)	-1.1	-0.2	-1.7	-1.8	-0.8
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.6	-0.2	-3.5	-1.1	-1.1
stress	Sisomicin 0.008 mg/ml	-0.0	-0.7	-3.5	-0.4	-0.2
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-1.6	-0.6	-1.9	-0.1	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-1.5	-0.2	-1.8	-0.3	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.5	-0.5	-1.7	-0.7	+0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	+0.1	-2.1	-0.0	-0.6
phage	K. M5a1 KLEB26 MOI 0.1	-1.6	+0.5	-0.5	-0.6	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.5	-0.2	-2.4	+0.2	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.2	-0.7	-2.2	+0.1	-0.1
nitrogen source	L-Arginine (N)	-2.1	+0.5	-0.1	-0.3	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.6	-0.3	-1.1	-1.5	+0.2
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.4	-0.3	-1.2	-0.9	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.4	-0.5	-1.5	-0.3	+0.4
stress	Sisomicin 0.008 mg/ml	+0.7	+0.6	-2.0	-0.0	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+1.0	+0.1	-1.6	-0.2	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+1.2	-1.5	-0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	+1.0	-1.4	+0.5	+0.1
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-1.1	-0.3	+1.3	+0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+1.1	-0.9	-0.3	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.1	+0.2	-1.2	+0.4	+0.2
stress	Cephalothin 0.16 mg/ml	-0.5	-0.2	+1.9	-0.5	+0.1
stress	Paraquat dichloride 0.1 mg/ml	+0.9	+0.4	-1.2	+0.6	+0.2
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+1.3	+0.4	-1.2	+0.5	+0.2
stress	Chloramphenicol 0.001 mg/ml	+0.1	-0.7	+3.6	-0.8	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	-0.1	+0.0	+2.9	-0.4	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.6	-0.3	+1.8	+0.8	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.1	+2.9	+0.2	+0.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+1.4	-0.2	+2.1	-0.3	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	+0.0	+3.2	+0.1	-0.2