Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS09895	BWI76_RS09900	BWI76_RS09905	BWI76_RS09910	BWI76_RS09915
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.4	-0.2	-1.3	-6.1	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.3	-0.4	-0.3	-6.2	-0.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.8	-0.1	-0.2	-5.9	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.5	-0.1	-0.4	-6.3	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	-0.4	-0.4	-1.3	-4.6	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.0	+0.1	-0.3	-6.9	+0.1
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	-0.1	+0.0	-0.2	-6.3	+0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.5	+0.3	+0.2	-6.5	-0.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.3	-0.2	-0.2	-5.9	+0.2
carbon source	D-Glucose 20 mM (C)	-0.0	-0.2	-0.5	-5.8	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.3	+0.2	+0.2	-6.4	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.1	+0.6	-0.1	-6.6	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9	-0.3	+0.5	-5.1	-0.2
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-0.0	-0.0	-0.2	-6.2	+0.3
supernatant control	Vogels_fungal_media; pH 5.5	-0.4	+0.4	+0.7	-6.7	-0.1
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	+0.2	+0.2	-0.2	-6.2	+0.2
supernatant control	Vogels_fungal_media; pH 5.5	+0.1	+0.5	-0.0	-6.5	+0.2
nitrogen source	Glycine (N)	-0.4	+0.5	-0.4	-5.5	-0.0
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.5	+0.3	+0.3	-5.5	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.3	+0.0	+0.4	-6.2	-0.0
supernatant control	Vogels_fungal_media 0.1X	+0.0	+0.6	-0.7	-5.8	+0.5
nitrogen source	L-Serine (N)	-0.6	-0.1	+0.5	-5.4	+0.6
supernatant control	Vogels_fungal_media 0.1X	+0.1	+0.5	+0.2	-6.1	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.0	+0.1	-0.2	-5.3	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2	+0.4	+0.9	-4.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5	+0.7	+0.3	-4.7	+0.6
nitrogen source	Parabanic Acid (N)	+0.5	+0.4	+0.5	-5.1	+0.2
nitrogen source	L-Arginine (N)	+1.0	+0.5	+0.6	-5.1	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.7	+0.1	+0.4	-4.8	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+3.7	-0.2	-0.1	-4.7	+0.1