Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09880 and BWI76_RS09885 are separated by 308 nucleotidesBWI76_RS09885 and BWI76_RS09890 are separated by 328 nucleotidesBWI76_RS09890 and BWI76_RS09895 are separated by 66 nucleotidesBWI76_RS09895 and BWI76_RS09900 overlap by 4 nucleotides BWI76_RS09880: BWI76_RS09880 - asparagine--tRNA ligase, at 2,075,865 to 2,077,265 _RS09880 BWI76_RS09885: BWI76_RS09885 - nicotinate phosphoribosyltransferase, at 2,077,574 to 2,078,776 _RS09885 BWI76_RS09890: BWI76_RS09890 - aminopeptidase N, at 2,079,105 to 2,081,720 _RS09890 BWI76_RS09895: BWI76_RS09895 - aliphatic sulfonates ABC transporter ATP-binding protein, at 2,081,787 to 2,082,560 _RS09895 BWI76_RS09900: BWI76_RS09900 - alkanesulfonate transporter permease subunit, at 2,082,557 to 2,083,348 _RS09900
Group Condition BWI76_RS09880 BWI76_RS09885 BWI76_RS09890 BWI76_RS09895 BWI76_RS09900
stress Paraquat dichloride 0.1 mg/ml N.D. -0.7 -0.7 -0.3 -0.4
stress Cobalt chloride 0.5 mM N.D. -0.1 -0.3 -1.9 +0.2
stress Nickel (II) chloride 1.5 mM N.D. +0.2 -1.4 -0.8 +0.3
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. -0.1 +0.3 -1.6 -0.2
phage KLEB20 MOI 1 N.D. -0.3 -0.6 +0.3 -0.8
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. -0.2 +0.4 -0.8 -0.6
stress Nickel (II) chloride 1.5 mM N.D. +0.4 -1.3 -0.2 +0.1
phage K. M5a1 KLEB10 MOI 10 N.D. +0.2 -0.5 +0.6 -1.0
phage K. M5a1 KLEB23 MOI 10 N.D. -0.4 -0.1 +0.9 -1.1
nitrogen source Uridine (N) N.D. -0.0 -0.2 -1.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.1 +0.2 -1.2 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.7 -0.4 +0.9 -0.2
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. +0.2 +0.2 +0.6 -1.0
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM N.D. -0.3 +0.4 +0.7 -0.6
nitrogen source L-Arginine (N) N.D. -0.2 -0.2 +1.0 +0.5
phage KLEB15 MOI 0.1 N.D. -0.2 -0.2 +1.7 -0.0
phage KLEB16 MOI 1 N.D. +0.3 +0.6 +0.6 -0.3
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL N.D. +0.2 +0.6 +0.8 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 +0.2 +0.8 +0.6
phage KLEB29 MOI 0.1 N.D. +0.2 -0.3 +1.1 +0.4
stress RCH2_defined_1percent_glucose with Chloride 600 mM N.D. +0.5 +0.5 +0.7 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 +0.0 +1.7 +0.1
phage KLEB29 MOI 1 N.D. +0.4 -0.1 +1.7 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 +0.2 +0.7 +0.7
phage KLEB29 MOI 1 N.D. +0.4 +0.3 +1.2 +0.0
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL N.D. -0.3 +0.5 +2.4 -0.5
phage KLEB30 MOI 1 N.D. +0.1 -0.1 +1.5 +0.6
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. +1.0 +0.4 +0.5 +0.2
phage K. M5a1 KLEB26 MOI 0.1 N.D. +0.1 +0.3 +2.0 +1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 +1.0 +3.7 -0.2
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