Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09805 and BWI76_RS09810 are separated by 52 nucleotidesBWI76_RS09810 and BWI76_RS09815 overlap by 4 nucleotidesBWI76_RS09815 and BWI76_RS09820 are separated by 141 nucleotidesBWI76_RS09820 and BWI76_RS09825 overlap by 24 nucleotides BWI76_RS09805: BWI76_RS09805 - hypothetical protein, at 2,057,907 to 2,059,136 _RS09805 BWI76_RS09810: BWI76_RS09810 - hypothetical protein, at 2,059,189 to 2,059,371 _RS09810 BWI76_RS09815: BWI76_RS09815 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,059,368 to 2,060,114 _RS09815 BWI76_RS09820: BWI76_RS09820 - hypothetical protein, at 2,060,256 to 2,061,149 _RS09820 BWI76_RS09825: BWI76_RS09825 - envelope biogenesis factor ElyC, at 2,061,126 to 2,061,905 _RS09825
Group Condition BWI76_RS09805 BWI76_RS09810 BWI76_RS09815 BWI76_RS09820 BWI76_RS09825
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.1 N.D. N.D. -0.6 -4.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.2 N.D. N.D. +0.1 -2.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.1 N.D. N.D. -0.2 -2.7
supernatant control Vogels_fungal_media; pH 5.5 -0.4 N.D. N.D. -0.4 -1.8
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.0 N.D. N.D. -0.4 -1.9
stress Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL +0.2 N.D. N.D. -0.0 -2.4
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.4 N.D. N.D. -0.2 -1.7
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 N.D. N.D. +0.1 -2.0
phage K. M5a1 KLEB26 MOI 0.1 -1.1 N.D. N.D. -1.4 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. N.D. -0.9 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 N.D. N.D. +0.4 -2.0
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM +0.2 N.D. N.D. +0.2 -2.0
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.0 N.D. N.D. +0.3 -1.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.2 N.D. N.D. +0.5 -1.9
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.1 N.D. N.D. +0.4 -1.8
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.9 N.D. N.D. +0.5 -1.0
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.2 N.D. N.D. +0.3 -1.8
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.9 N.D. N.D. +0.7 -0.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 N.D. N.D. -0.3 -1.4
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.5 N.D. N.D. +0.7 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 N.D. N.D. +1.1 -2.2
nitrogen source D-Alanine (N) +0.2 N.D. N.D. -1.1 +1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 N.D. N.D. +1.6 -0.2
phage KLEB24 MOI 1 +0.8 N.D. N.D. +0.2 +1.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.8 N.D. N.D. +0.9 +0.7
phage KLEB17 MOI 1 +0.2 N.D. N.D. +1.2 +1.3
phage KLEB24 MOI 1 +0.8 N.D. N.D. +0.8 +1.1
phage K. M5a1 KLEB23 MOI 1 +1.3 N.D. N.D. +0.7 +0.8
phage KLEB29 MOI 1 +0.8 N.D. N.D. +0.7 +1.4
phage KLEB29 MOI 1 +1.2 N.D. N.D. +0.7 +1.5
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BWI76_RS09805
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BWI76_RS09810
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BWI76_RS09825
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