Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09380 and BWI76_RS09385 overlap by 8 nucleotidesBWI76_RS09385 and BWI76_RS09390 overlap by 4 nucleotidesBWI76_RS09390 and BWI76_RS09395 overlap by 4 nucleotidesBWI76_RS09395 and BWI76_RS09400 are separated by 76 nucleotides BWI76_RS09380: BWI76_RS09380 - GpE family phage tail protein, at 1,967,552 to 1,967,671 _RS09380 BWI76_RS09385: BWI76_RS09385 - phage tail tape measure protein, at 1,967,664 to 1,970,291 _RS09385 BWI76_RS09390: BWI76_RS09390 - phage tail protein, at 1,970,288 to 1,970,773 _RS09390 BWI76_RS09395: BWI76_RS09395 - late control gene D protein, at 1,970,770 to 1,971,855 _RS09395 BWI76_RS09400: BWI76_RS09400 - phage transcriptional activator, Ogr/delta, at 1,971,932 to 1,972,147 _RS09400
Group Condition BWI76_RS09380 BWI76_RS09385 BWI76_RS09390 BWI76_RS09395 BWI76_RS09400
nitrogen source L-Arginine (N) N.D. -0.2 -0.9 -0.4 -0.6
phage KLEB29 MOI 1 N.D. -0.5 -1.3 +0.0 -0.1
phage KLEB24 MOI 1 N.D. -0.2 -1.3 +0.2 -0.5
phage KLEB30 MOI 1 N.D. -0.4 -0.6 +0.2 -1.0
nitrogen source L-Tryptophan (N) N.D. +0.1 -1.2 -0.6 +0.1
phage K. M5a1 KLEB10 MOI 10 N.D. -0.5 -0.8 +0.3 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.0 -1.1 -0.7 +0.0
nitrogen source Thymine (N) N.D. -0.2 +0.3 -0.2 -1.5
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. +0.1 -0.6 -0.3 -0.8
phage KLEB24 MOI 1 N.D. -0.5 -1.0 +0.1 -0.1
phage KLEB16 MOI 1 N.D. -0.2 -0.8 +0.4 -0.7
phage KLEB29 MOI 1 N.D. -0.3 -0.6 +0.3 -0.7
carbon source Adenosine (C) N.D. +0.2 -1.1 +0.4 -0.5
phage KLEB17 MOI 1 N.D. +0.3 -0.4 +0.3 -1.2
nitrogen source nitrate (N) N.D. -0.0 -0.7 +0.5 -0.6
phage KLEB30 MOI 1 N.D. +0.1 -0.4 +0.5 -0.9
carbon source D-Alanine (C) N.D. +0.3 -1.3 +0.3 -0.0
nitrogen source Gly-DL-Asp (N) N.D. -0.7 -0.4 -0.3 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.5 -0.8 +0.2 -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -0.3 +0.7 -0.1 -0.7
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. +0.2 -0.4 +0.6 -0.7
carbon source D-Glucose 20 mM (C) N.D. -0.1 -1.1 +0.7 +0.5
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. +0.3 -0.9 -0.2 +0.8
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.1 +0.8 -0.2 -0.7
stress Paraquat dichloride 0.1 mg/ml N.D. -0.2 +0.8 +0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.2 +1.4 -0.1 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.4 +0.8 -0.6 +0.2
stress Cobalt chloride 0.5 mM N.D. -0.2 -0.4 +1.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 +0.6 -0.4 +1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 +2.3 +0.0 +0.1
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