Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09345 and BWI76_RS09350 overlap by 4 nucleotidesBWI76_RS09350 and BWI76_RS09355 are separated by 25 nucleotidesBWI76_RS09355 and BWI76_RS09360 are separated by 10 nucleotidesBWI76_RS09360 and BWI76_RS09365 are separated by 149 nucleotides BWI76_RS09345: BWI76_RS09345 - phage tail protein I, at 1,960,751 to 1,961,359 _RS09345 BWI76_RS09350: BWI76_RS09350 - hypothetical protein, at 1,961,356 to 1,963,533 _RS09350 BWI76_RS09355: BWI76_RS09355 - hypothetical protein, at 1,963,559 to 1,964,257 _RS09355 BWI76_RS09360: BWI76_RS09360 - hypothetical protein, at 1,964,268 to 1,965,338 _RS09360 BWI76_RS09365: BWI76_RS09365 - phage tail sheath protein, at 1,965,488 to 1,966,660 _RS09365
Group Condition BWI76_RS09345 BWI76_RS09350 BWI76_RS09355 BWI76_RS09360 BWI76_RS09365
phage KP2_E1_R2_1 +0.4 +0.1 -0.0 -2.3 -0.3
nitrogen source L-Arginine (N) -0.2 -0.1 +0.2 -1.9 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.1 -0.6 -0.4 -0.6
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.4 -0.8 -0.6 +0.3 +0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -0.9 -0.0 +0.2 -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.5 -0.5 -0.1 -0.3 +0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.2 -0.4 -0.1 -0.9 +0.0
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.5 -0.0 -0.4 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.4 -0.1 -0.4 +0.2
stress Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL -0.3 -0.5 -0.2 -0.3 +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.8 +0.0 -0.1 +0.5
phage KLEB31 MOI 1 +0.3 +0.1 -0.3 -0.5 -0.3
nitrogen source D-Alanine (N) -0.3 -0.1 +0.1 -0.9 +0.3
phage KP4_E4_R2_1 +0.3 +0.3 -0.0 -1.1 -0.2
stress Chloramphenicol 0.001 mg/ml +0.6 -0.2 -0.1 -1.0 +0.0
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.3 -0.4 -0.4 +0.3 +0.2
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.3 -0.3 -0.3 +0.5 -0.1
nitrogen source Glucuronamide (N) +0.2 +0.1 -0.1 -0.9 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.5 -0.2 +0.3 +0.3
phage KP2_E3_R2_1 +0.3 +0.1 +0.1 -0.9 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.3 -0.3 -0.2 +0.8 -0.0
stress Paraquat dichloride 0.1 mg/ml +0.4 +0.1 +0.2 +0.3 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.0 -0.2 +1.0 -0.3
nitrogen source Cytosine (N) +0.4 +0.1 -0.3 +0.6 -0.3
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.1 -0.6 -0.0 +0.7 +0.4
phage KLEB1 MOI 10 +0.2 +0.4 -0.4 +0.9 -0.1
carbon source Gly-Glu (C) -0.1 +0.1 +0.8 -0.2 +0.5
phage MM23 -0.1 +0.1 +0.1 +1.0 +0.2
phage ER37 +0.0 +0.0 +0.2 +0.9 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.0 +0.2 +2.1 -0.1
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