Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09185 and BWI76_RS09190 are separated by 79 nucleotidesBWI76_RS09190 and BWI76_RS09195 overlap by 23 nucleotidesBWI76_RS09195 and BWI76_RS09200 are separated by 10 nucleotidesBWI76_RS09200 and BWI76_RS09205 are separated by 11 nucleotides BWI76_RS09185: BWI76_RS09185 - integrase, at 1,939,457 to 1,940,503 _RS09185 BWI76_RS09190: BWI76_RS09190 - hypothetical protein, at 1,940,583 to 1,940,954 _RS09190 BWI76_RS09195: BWI76_RS09195 - N-acetyltransferase, at 1,940,932 to 1,942,005 _RS09195 BWI76_RS09200: BWI76_RS09200 - hypothetical protein, at 1,942,016 to 1,942,600 _RS09200 BWI76_RS09205: BWI76_RS09205 - phage repressor protein CI, at 1,942,612 to 1,943,172 _RS09205
Group Condition BWI76_RS09185 BWI76_RS09190 BWI76_RS09195 BWI76_RS09200 BWI76_RS09205
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.4 -1.9 -3.2 -1.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -2.0 -3.3 -1.0 N.D.
stress RCH2_defined_1percent_glucose with Chloride 400 mM and Betaine 100 uM +0.2 -2.1 -3.3 -0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.1 -1.8 -2.5 -0.9 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.0 -1.7 -2.4 -1.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -0.1 -1.7 -2.3 -1.2 N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.1 -3.9 -0.6 -0.9 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.6 -1.9 -1.9 -0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -4.0 -0.5 -0.5 N.D.
phage KLEB15 MOI 10 -0.3 -1.0 -3.2 -0.3 N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.4 -1.3 -1.7 -1.2 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 -1.9 -2.5 -0.1 N.D.
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x -0.3 -1.1 -2.5 -0.6 N.D.
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.0 -1.2 -2.4 -0.9 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.3 -1.8 -2.4 -0.7 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -1.4 -2.5 -0.3 N.D.
no stress control RCH2_defined_1percent_glucose; no stress -0.0 -1.7 -2.4 -0.4 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.0 -1.8 -2.4 -0.3 N.D.
stress RCH2_defined_1percent_glucose with Chloride 400 mM +0.0 -2.1 -2.2 -0.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.7 -1.6 +0.4 N.D.
nitrogen source L-Arginine (N) -0.2 -0.5 -3.9 +0.4 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.2 -2.0 -0.9 -1.3 N.D.
phage K. M5a1 KLEB26 MOI 0.1 +0.3 -1.9 -2.5 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -3.8 +0.3 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 -3.9 -0.3 +0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -2.7 -1.2 +0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 -3.5 +0.1 +0.3 N.D.
stress Sisomicin 0.008 mg/ml -0.1 -3.5 +0.9 +0.2 N.D.
nitrogen source L-tyrosine (N) +0.0 -2.6 +1.3 -0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.8 +2.4 -0.5 N.D.
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