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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS09065 and BWI76_RS09070 are separated by 209 nucleotides
BWI76_RS09070 and BWI76_RS09075 are separated by 4 nucleotides
BWI76_RS09075 and BWI76_RS09080 are separated by 152 nucleotides
BWI76_RS09080 and BWI76_RS09085 overlap by 1 nucleotides
BWI76_RS09065: BWI76_RS09065 - sugar phosphatase SupH, at 1,912,581 to 1,913,396
_RS09065
BWI76_RS09070: BWI76_RS09070 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 1,913,606 to 1,916,038
_RS09070
BWI76_RS09075: BWI76_RS09075 - pyruvate formate lyase-activating protein, at 1,916,043 to 1,916,942
_RS09075
BWI76_RS09080: BWI76_RS09080 - molybdopterin-synthase adenylyltransferase MoeB, at 1,917,095 to 1,917,850
_RS09080
BWI76_RS09085: BWI76_RS09085 - molybdopterin molybdenumtransferase MoeA, at 1,917,850 to 1,919,085
_RS09085
Group
Condition
BWI76
_RS09065
BWI76
_RS09070
BWI76
_RS09075
BWI76
_RS09080
BWI76
_RS09085
phage
K. M5a1 KLEB23 MOI 1
-0.7
-0.4
-0.2
-1.4
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-1.5
+0.1
-0.0
-1.8
-0.1
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.6
+0.3
-0.0
-1.4
-1.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+1.3
+0.4
-0.0
-1.6
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
-0.0
+0.3
+1.2
+1.2
nitrogen source
L-Proline (N)
-0.4
+0.2
+0.1
+1.0
+1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.2
+0.2
+1.1
+1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.5
+0.3
+2.1
-0.2
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
+0.6
-0.2
+0.3
+0.6
+1.2
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
+0.8
+0.5
-0.2
+0.4
+1.0
nitrogen source
L-Isoleucine (N)
-0.2
+0.2
+0.3
+1.1
+1.2
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.3
+0.1
+0.3
+0.8
+1.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.3
+0.5
+1.7
+1.1
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+1.2
+0.2
+0.0
+0.3
+0.9
nitrogen source
L-Phenylalanine (N)
-0.2
+0.3
+0.2
+1.3
+1.2
nitrogen source
L-Threonine (N)
+0.2
-0.0
+0.1
+1.5
+1.4
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
+0.7
+0.1
+0.3
+0.9
+1.1
nitrogen source
Thymidine (N)
+0.2
+0.1
-0.0
+1.5
+1.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.5
-0.1
+0.6
+2.2
nitrogen source
Thymine (N)
-0.2
+0.2
+0.0
+1.5
+2.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.0
+0.1
+1.4
+2.2
nitrogen source
L-Threonine (N)
+0.2
+0.3
+0.1
+1.4
+1.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
+0.2
+0.2
+1.3
+1.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
+0.3
-0.2
+1.5
+1.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
-0.2
+0.4
+1.8
+1.6
stress
Sisomicin 0.008 mg/ml
+0.1
-0.1
-0.0
+3.1
+2.6
stress
Sisomicin 0.008 mg/ml
+0.3
-0.1
+0.2
+2.7
+2.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.3
+0.9
+3.7
+3.3
stress
perchlorate 100 mM
-0.0
-0.0
+0.2
+7.3
+7.1
stress
perchlorate 100 mM
+0.0
+0.2
-0.0
+7.5
+7.4
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