Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS09025 and BWI76_RS09030 are separated by 43 nucleotidesBWI76_RS09030 and BWI76_RS09035 are separated by 190 nucleotidesBWI76_RS09035 and BWI76_RS09040 are separated by 177 nucleotidesBWI76_RS09040 and BWI76_RS09045 are separated by 168 nucleotides BWI76_RS09025: BWI76_RS09025 - GntR family transcriptional regulator, at 1,901,544 to 1,902,260 _RS09025 BWI76_RS09030: BWI76_RS09030 - transpeptidase, at 1,902,304 to 1,903,218 _RS09030 BWI76_RS09035: BWI76_RS09035 - protein tyrosine/serine phosphatase, at 1,903,409 to 1,904,191 _RS09035 BWI76_RS09040: BWI76_RS09040 - ABC-F family ATPase, at 1,904,369 to 1,905,961 _RS09040 BWI76_RS09045: BWI76_RS09045 - alpha-glucosidase, at 1,906,130 to 1,908,493 _RS09045
Group Condition BWI76_RS09025 BWI76_RS09030 BWI76_RS09035 BWI76_RS09040 BWI76_RS09045
stress Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL +0.6 -4.6 +0.2 -0.4 -0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.5 -1.6 -0.0 -0.1 +0.1
carbon source D,L-Malic Acid (C) +0.1 -3.8 -0.2 -0.0 +0.0
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -2.1 -1.5 -0.2 -0.0 +0.0
nitrogen source Casamino Acids (N) -3.1 -0.7 -0.0 +0.2 -0.1
phage K. M5a1 KLEB26 MOI 0.1 -0.4 -0.7 -1.9 -0.1 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.0 -2.2 -0.3 +0.1 +0.2
nitrogen source Uridine (N) -0.7 -0.9 -0.3 -0.6 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -1.2 -0.5 -1.1 +0.2
carbon source D,L-Malic Acid (C) -0.2 -3.0 +0.3 +0.2 +0.0
stress Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM -1.2 -1.5 +0.3 +0.1 -0.3
supernatant control Vogels_fungal_media 0.1X -1.4 -1.5 +0.2 +0.3 -0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -1.5 -0.7 +0.5 -0.2 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.0 -1.2 +0.6 -0.3 +0.1
nitrogen source Uridine (N) -1.7 -0.7 +0.4 -0.2 +0.4
carbon source 2'-Deoxyinosine 5 mM (C) -2.3 -0.5 +0.7 +0.1 +0.5
nitrogen source L-Arginine (N) -1.6 -0.6 +0.6 +0.4 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 +0.2 -0.1 -0.6 +0.8
phage KLEB17 MOI 1 -0.9 -0.9 +0.4 -0.6 +0.6
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.9 -2.0 -0.0 +0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.3 -1.1 +0.7 +0.6 -0.5
phage KLEB17 MOI 1 -1.4 -0.1 +0.7 -0.4 +0.6
stress Sisomicin 0.008 mg/ml +1.1 -2.0 +0.6 -0.0 -0.2
nitrogen source L-Arginine (N) +1.1 -1.3 +0.4 -0.6 +0.5
stress Sisomicin 0.008 mg/ml +0.9 -1.4 +1.0 -0.4 +0.6
nitrogen source Glucuronamide (N) +1.7 -1.0 +0.1 -0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 -0.5 +0.4 -0.6 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.4 +0.2 -0.0 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +4.2 -1.2 -0.7 -0.1 +0.1
carbon source Gly-Glu (C) +0.2 +0.5 +1.8 -0.7 +0.6
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