Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS08960 and BWI76_RS08965 are separated by 110 nucleotidesBWI76_RS08965 and BWI76_RS08970 overlap by 4 nucleotidesBWI76_RS08970 and BWI76_RS08975 are separated by 134 nucleotidesBWI76_RS08975 and BWI76_RS08980 are separated by 376 nucleotides BWI76_RS08960: BWI76_RS08960 - mechanosensitive channel protein, at 1,887,562 to 1,889,772 _RS08960 BWI76_RS08965: BWI76_RS08965 - glutamine ABC transporter ATP-binding protein, at 1,889,883 to 1,890,605 _RS08965 BWI76_RS08970: BWI76_RS08970 - glutamine ABC transporter permease GlnP, at 1,890,602 to 1,891,261 _RS08970 BWI76_RS08975: BWI76_RS08975 - amino acid ABC transporter substrate-binding protein, at 1,891,396 to 1,892,142 _RS08975 BWI76_RS08980: BWI76_RS08980 - DNA starvation/stationary phase protection protein, at 1,892,519 to 1,893,022 _RS08980
Group Condition BWI76_RS08960 BWI76_RS08965 BWI76_RS08970 BWI76_RS08975 BWI76_RS08980
carbon source L-Glutamine (C) -0.2 -2.1 -1.4 -2.4 -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.0 -0.6 +0.1 -4.4
phage KLEB15 MOI 1 -0.2 -0.2 -0.5 -0.4 -2.2
stress perchlorate 100 mM -0.1 +0.2 -0.4 -0.5 -2.4
stress Paraquat dichloride 0.1 mg/ml -0.2 +0.1 -0.5 -0.2 -2.4
nitrogen source L-Cysteine (N) +0.6 -0.1 -0.6 -0.3 -2.3
carbon source L-Lactate (C) +0.2 -0.5 +0.2 -0.4 -2.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 +0.7 -1.4 -1.6 +0.4
stress nitrite 20 mM +0.1 -0.3 +0.6 -0.8 -2.2
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.0 +0.5 -0.6 -0.5 -1.8
carbon source Glycerol (C) +0.2 -0.3 -0.7 +0.4 -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.3 -0.1 +0.2 -2.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.0 -0.1 -2.2 +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.4 +0.7 -1.0 -0.5 -1.0
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 +0.8 +0.8 -0.4 -2.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM +0.4 -0.4 -1.3 +0.8 -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 -0.6 -1.2 +1.3 -0.2
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.1 -0.2 +0.9 +0.5 -1.4
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL -0.0 +0.4 +0.2 -1.4 +1.3
nitrogen source Gly-DL-Asp (N) +0.1 +0.0 +0.8 -2.1 +1.6
phage KLEB24 MOI 1 +0.1 -0.1 +1.0 -0.8 +1.1
phage KLEB29 MOI 1 -0.1 +0.3 +0.8 -0.7 +1.2
phage B3 MOi 10 -0.2 +0.1 +0.5 -0.5 +2.0
carbon source Gly-Glu (C) -0.4 -0.4 +2.8 +0.6 -0.6
nitrogen source D-Alanine (N) +0.1 +0.3 +1.2 -0.8 +1.3
phage KLEB15 MOI 0.1 -0.0 +0.3 +1.0 -0.7 +1.5
nitrogen source L-tyrosine (N) +0.3 +0.7 +0.4 -0.3 +1.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.0 +0.6 +0.6 +1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 +2.0 +0.4 -0.1 +0.5
phage KLEB1 MOI 10 +0.3 +0.4 +0.2 +0.8 +1.5
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