Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS08930	BWI76_RS08935	BWI76_RS08940	BWI76_RS08945	BWI76_RS08950
phage	KLEB29 MOI 1	N.D.	N.D.	-0.7	-0.6	-0.8
phage	KLEB30 MOI 1	N.D.	N.D.	-0.8	-0.5	-0.2
phage	KLEB29 MOI 1	N.D.	N.D.	-0.5	-0.5	-0.4
phage	KLEB24 MOI 1	N.D.	N.D.	-0.5	-0.4	-0.4
phage	KLEB24 MOI 1	N.D.	N.D.	-0.3	-0.3	-0.7
phage	K. M5a1 KLEB26 MOI 0.1	N.D.	N.D.	-0.8	-0.3	-0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	N.D.	+0.1	+0.3	-0.8
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	N.D.	N.D.	+0.4	-0.5	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	N.D.	+0.1	-0.8	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	N.D.	N.D.	-0.1	-0.4	+0.6
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	N.D.	N.D.	+0.7	-0.5	-0.0
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	N.D.	-0.4	+0.4	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	N.D.	+0.6	-0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	-0.1	-0.3	+1.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	N.D.	N.D.	-0.3	+0.9	+0.4
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	N.D.	N.D.	-0.3	+0.6	+0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x	N.D.	N.D.	-0.3	+0.5	+0.9
phage	KLEB17 MOI 1	N.D.	N.D.	-0.2	+0.6	+0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	N.D.	N.D.	-0.4	+0.8	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	N.D.	+1.0	-0.2	+0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x	N.D.	N.D.	+0.2	+0.7	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	N.D.	N.D.	+0.2	+0.6	+0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x	N.D.	N.D.	-0.1	+0.8	+0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	N.D.	N.D.	-0.0	+0.8	+0.5
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	N.D.	N.D.	+0.3	+0.4	+0.6
micoeukaryotes	Dictyostellum sp.mixed culture-1	N.D.	N.D.	-0.1	+0.7	+0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	N.D.	-0.0	+1.0	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	N.D.	+0.9	-0.2	+0.8
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	N.D.	+0.3	+0.4	+1.0
micoeukaryotes	Dictyostellum sp.mixed culture-2	N.D.	N.D.	+0.3	+0.5	+1.1