Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS08770	BWI76_RS08775	BWI76_RS08780	BWI76_RS08785	BWI76_RS08790
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-1.1	-1.9	+0.2	-3.2	-1.2
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-0.4	-1.0	-0.4	-2.2	-1.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.2	-1.8	-1.0	-0.1	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-1.4	-1.4	+0.0	+0.2	-0.9
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.1	-1.5	+0.1	+0.3	-1.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.4	-1.0	-0.4	+0.1	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.9	-0.8	-0.5	-0.0	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.1	-0.8	-0.4	+0.5	-0.7
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.4	-0.3	-1.6	-0.3	+0.0
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-1.3	-0.2	-0.1	+0.3	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-1.0	-1.1	+0.4	-0.1	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.3	-0.5	-0.6	-0.7	-0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	-0.9	-0.3	+0.5	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.6	-1.0	+0.3	-0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+0.0	-0.4	-0.6	+0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	-0.8	+1.1	+0.1	-1.3
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.9	-0.6	+0.7	-0.0	-0.1
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.9	-0.5	-0.2	+0.5	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	-0.2	-0.9	-0.5	+0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.0	+0.5	-1.3	+0.7	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.5	+0.5	-0.1	+0.3	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	+0.4	-1.0	+1.1	+0.6
phage	KLEB31 MOI 1	-0.6	-0.1	+0.7	+0.8	-0.3
supernatant control	Vogels_fungal_media 0.1X	+0.7	+0.4	-0.5	-0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.4	+1.4	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5	+0.6	-0.2	+0.5	-0.3
nitrogen source	Thymidine (N)	-0.1	+0.4	+1.2	+0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+2.0	-0.1	-0.3	+0.6	-0.1
nitrogen source	Thymidine (N)	+0.1	+0.1	+1.4	+0.2	+0.3
nitrogen source	Thymine (N)	+0.4	+0.1	+1.5	+0.1	+0.4