Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS08750	BWI76_RS08755	BWI76_RS08760	BWI76_RS08765	BWI76_RS08770
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-2.3	-1.1	-3.7	-1.0	-1.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.4	-1.0	-3.1	-1.9	-1.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	-1.1	-3.9	-1.5	-1.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	-0.8	-2.6	-2.7	-1.2
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-0.3	-2.0	-3.2	-0.3	-1.1
nitrogen source	Uridine (N)	-1.4	-0.1	+0.7	-4.5	-0.5
nitrogen source	nitrate (N)	-0.3	-1.6	+0.6	-4.2	+0.0
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-4.7	-0.8	+0.6	+0.5	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.4	-0.2	-2.0	-1.9	-1.0
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-5.0	-0.1	+0.2	+0.7	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-3.3	-0.4	+0.3	+0.1	-1.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.7	-0.0	-3.8	-0.7	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.2	-1.1	-2.0	-0.6	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	-0.5	-2.1	+0.4	-0.9
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.0	-0.1	-2.9	+0.2	+0.4
stress	nitrite 20 mM	-0.5	-0.1	-0.3	-2.4	+0.7
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-1.7	+0.6	-0.1	-1.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-2.3	-0.4	+1.5	-0.1	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.5	+0.7	-2.7	+0.8	+0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-2.0	+0.2	-0.5	+1.4	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.7	+0.0	-2.1	+1.3	+0.4
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-3.0	+0.5	+0.1	+1.0	+0.6
stress	Paraquat dichloride 0.1 mg/ml	-2.2	-0.1	+0.5	+1.1	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-1.5	+0.2	+0.4	+1.5	+0.6
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-1.3	+0.2	+0.5	+1.8	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.6	+0.5	+0.1	+0.6	+2.0
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-1.8	+0.5	+0.2	+2.0	+0.8
phage	KLEB17 MOI 1	+1.9	-0.9	+0.4	+0.4	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+1.1	+2.2	-0.2	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+0.0	+0.1	+4.8	+0.0