Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS08680	BWI76_RS08685	BWI76_RS08690	BWI76_RS08695	BWI76_RS08700
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.5	-1.0	-0.7	-0.5	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.2	-0.5	-0.4	-0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x	-0.4	-0.3	-0.4	-0.1	-1.0
phage	KLEB17 MOI 0.1	-0.5	-0.4	-0.3	+0.0	-0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.8	-0.4	-0.3	-0.0	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.8	-0.0	-0.1	-0.1	-0.8
stress	Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL	-0.3	-0.3	-0.5	-0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.1	+0.2	-0.0	-1.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.8	-0.4	+0.1	-0.2	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	-0.3	-1.1	-0.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+0.1	-0.2	+0.3	-1.8
nitrogen source	L-Arginine (N)	+0.4	-0.3	-0.7	-0.2	-0.7
nitrogen source	L-Arginine (N)	-0.3	-0.0	+0.2	-0.0	-1.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.3	-0.4	+0.2	-0.1	-1.4
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.6	-0.1	-0.7	-0.0	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.2	+0.1	+0.2	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	-0.0	+0.3	+0.2	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.2	+0.3	+0.5	+0.2	-1.2
phage	KP2_E1_R2_1	-0.4	+0.2	-0.4	+0.1	+0.6
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	-0.2	-0.2	-0.1	-0.1	+1.3
phage	KLEB29 MOI 1	-0.5	+0.1	-0.1	+0.1	+1.2
stress	Cephalothin 0.16 mg/ml	-0.3	-0.1	-0.1	+0.1	+1.5
phage	KP5_E1_R2_1	-0.2	+0.3	+0.3	+0.3	+0.8
stress	Cephalothin 0.16 mg/ml	+0.1	-0.1	+0.1	+0.1	+1.6
phage	KP19_E3_R2_1	-0.0	+0.1	-0.1	-0.0	+1.8
phage	KP19_E3_R2_1	-0.0	+0.0	+0.0	+0.0	+1.7
phage	KP2_E1_R2_2	+0.0	+0.2	-0.1	+0.1	+1.6
phage	ER101	-0.1	+0.2	+0.2	+0.1	+2.1
phage	ER101	-0.1	+0.1	-0.0	-0.0	+2.6
phage	Roth35v2	+0.2	+0.7	+0.5	+0.4	+0.7