Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS08480 and BWI76_RS08485 are separated by 16 nucleotidesBWI76_RS08485 and BWI76_RS08490 overlap by 1 nucleotidesBWI76_RS08490 and BWI76_RS08495 are separated by 1215 nucleotidesBWI76_RS08495 and BWI76_RS08500 are separated by 15 nucleotides BWI76_RS08480: BWI76_RS08480 - methylaspartate mutase subunit E, at 1,795,580 to 1,797,025 _RS08480 BWI76_RS08485: BWI76_RS08485 - glutamate mutase, at 1,797,042 to 1,798,430 _RS08485 BWI76_RS08490: BWI76_RS08490 - methylaspartate mutase, at 1,798,430 to 1,798,879 _RS08490 BWI76_RS08495: BWI76_RS08495 - cytochrome bd-I ubiquinol oxidase subunit I, at 1,800,095 to 1,801,663 _RS08495 BWI76_RS08500: BWI76_RS08500 - cytochrome d ubiquinol oxidase subunit 2, at 1,801,679 to 1,802,818 _RS08500
Group Condition BWI76_RS08480 BWI76_RS08485 BWI76_RS08490 BWI76_RS08495 BWI76_RS08500
nitrogen source L-Cysteine (N) -0.3 +0.1 -0.2 -5.5 -5.1
nitrogen source L-Cysteine (N) +0.1 -0.5 -0.2 -4.8 -3.7
pH LB, pH10 +0.0 -0.0 -0.0 -3.8 -3.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.1 -0.1 -3.4 -3.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.0 +0.0 -2.2 -4.1
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 +0.0 -0.1 -2.7 -3.6
stress Chlorite 2.5 mM -0.2 -0.0 -0.4 -3.4 -2.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.5 +0.1 -3.6 -2.0
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.6 -0.1 -0.2 -3.5 -1.3
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.1 -0.4 -0.3 -2.6 -2.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM +0.1 -0.0 -0.1 -2.9 -2.8
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.2 +0.0 +0.1 -3.2 -2.3
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL +0.1 -0.0 +0.1 -2.5 -3.1
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.1 -0.1 -0.2 -1.9 -3.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM +0.1 -0.2 -0.1 -3.0 -2.3
stress Benzalkonium Chloride 0.004mg/ml -0.2 -0.3 +0.0 -2.6 -2.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.1 -0.4 +0.1 -2.3 -2.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM -0.0 -0.2 -0.2 -1.9 -2.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.0 -0.4 +0.1 -2.6 -2.2
stress A22 0.1 mg/ml +0.1 -0.2 +0.3 -1.9 -3.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +0.2 -0.1 -2.1 -3.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.8 -0.1 -2.8 -2.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.1 -0.2 +0.1 -1.7 -3.0
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.3 +0.3 -0.6 -2.6 -1.5
carbon source L-Sorbose (C) -0.0 +0.6 +0.2 -2.3 -2.5
stress Nickel (II) chloride 1.5 mM +0.2 -0.0 -0.1 +3.4 +3.3
stress Nickel (II) chloride 1.5 mM -0.0 -0.3 -0.1 +3.6 +3.8
stress Sisomicin 0.008 mg/ml +0.3 +0.0 -0.2 +4.5 +4.2
phage K. M5a1 KLEB26 MOI 0.1 +0.0 -0.3 +0.3 +4.4 +4.9
stress Sisomicin 0.008 mg/ml +0.1 +0.1 +0.1 +7.8 +7.1
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