Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS08410 and BWI76_RS08415 are separated by 380 nucleotidesBWI76_RS08415 and BWI76_RS08420 are separated by 14 nucleotidesBWI76_RS08420 and BWI76_RS08425 are separated by 99 nucleotidesBWI76_RS08425 and BWI76_RS08430 overlap by 1 nucleotides BWI76_RS08410: BWI76_RS08410 - succinate dehydrogenase iron-sulfur subunit, at 1,778,128 to 1,778,844 _RS08410 BWI76_RS08415: BWI76_RS08415 - 2-oxoglutarate dehydrogenase subunit E1, at 1,779,225 to 1,782,032 _RS08415 BWI76_RS08420: BWI76_RS08420 - dihydrolipoamide succinyltransferase, at 1,782,047 to 1,783,270 _RS08420 BWI76_RS08425: BWI76_RS08425 - succinyl-CoA ligase subunit beta, at 1,783,370 to 1,784,536 _RS08425 BWI76_RS08430: BWI76_RS08430 - succinate--CoA ligase subunit alpha, at 1,784,536 to 1,785,405 _RS08430
Group Condition BWI76_RS08410 BWI76_RS08415 BWI76_RS08420 BWI76_RS08425 BWI76_RS08430
carbon source Trisodium citrate (C) N.D. N.D. N.D. -4.5 -7.6
carbon source acetate (C) N.D. N.D. N.D. -5.8 -4.4
carbon source acetate (C) N.D. N.D. N.D. -5.7 -4.2
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. N.D. N.D. -4.0 -5.3
carbon source Trisodium citrate (C) N.D. N.D. N.D. -4.1 -4.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. -3.4 -5.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. N.D. -4.9 -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. -4.8 -2.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -4.3 -3.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. N.D. -3.0 -4.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -3.5 -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -3.6 -3.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -3.6 -2.9
carbon source L-Glutamine (C) N.D. N.D. N.D. -2.9 -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. N.D. -2.5 -3.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -3.5 -2.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. N.D. -3.5 -2.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. N.D. -3.2 -2.5
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. N.D. N.D. -2.9 -2.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -2.9 -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -2.6 -2.8
stress nitrite 20 mM N.D. N.D. N.D. -2.3 -3.0
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. N.D. -3.2 -2.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -2.8 -2.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. N.D. -2.6 -2.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -2.3 -2.8
carbon source D-Alanine (C) N.D. N.D. N.D. -2.6 -2.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. -3.6 -1.3
carbon source pyruvate (C) N.D. N.D. N.D. -2.6 -2.2
carbon source Gly-Glu (C) N.D. N.D. N.D. -1.8 -2.9
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