Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS08405 and BWI76_RS08410 are separated by 15 nucleotidesBWI76_RS08410 and BWI76_RS08415 are separated by 380 nucleotidesBWI76_RS08415 and BWI76_RS08420 are separated by 14 nucleotidesBWI76_RS08420 and BWI76_RS08425 are separated by 99 nucleotides BWI76_RS08405: BWI76_RS08405 - succinate dehydrogenase flavoprotein subunit, at 1,776,346 to 1,778,112 _RS08405 BWI76_RS08410: BWI76_RS08410 - succinate dehydrogenase iron-sulfur subunit, at 1,778,128 to 1,778,844 _RS08410 BWI76_RS08415: BWI76_RS08415 - 2-oxoglutarate dehydrogenase subunit E1, at 1,779,225 to 1,782,032 _RS08415 BWI76_RS08420: BWI76_RS08420 - dihydrolipoamide succinyltransferase, at 1,782,047 to 1,783,270 _RS08420 BWI76_RS08425: BWI76_RS08425 - succinyl-CoA ligase subunit beta, at 1,783,370 to 1,784,536 _RS08425
Group Condition BWI76_RS08405 BWI76_RS08410 BWI76_RS08415 BWI76_RS08420 BWI76_RS08425
carbon source Trisodium citrate (C) -4.9 N.D. N.D. N.D. -4.5
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -5.4 N.D. N.D. N.D. -4.0
carbon source acetate (C) -3.3 N.D. N.D. N.D. -5.7
carbon source acetate (C) -2.8 N.D. N.D. N.D. -5.8
carbon source Trisodium citrate (C) -4.4 N.D. N.D. N.D. -4.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.7 N.D. N.D. N.D. -4.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.0 N.D. N.D. N.D. -3.2
carbon source L-Glutamine (C) -4.2 N.D. N.D. N.D. -2.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.6 N.D. N.D. N.D. -3.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.7 N.D. N.D. N.D. -4.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.4 N.D. N.D. N.D. -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.4 N.D. N.D. N.D. -2.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.1 N.D. N.D. N.D. -4.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.1 N.D. N.D. N.D. -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.1 N.D. N.D. N.D. -3.6
carbon source D-Alanine (C) -4.1 N.D. N.D. N.D. -2.6
carbon source D-Lactate (C) -4.7 N.D. N.D. N.D. -1.9
carbon source D-Lactate (C) -4.2 N.D. N.D. N.D. -2.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.1 N.D. N.D. N.D. -3.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.8 N.D. N.D. N.D. -3.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -4.4 N.D. N.D. N.D. -1.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.3 N.D. N.D. N.D. -2.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.1 N.D. N.D. N.D. -3.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.4 N.D. N.D. N.D. -3.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -3.3 N.D. N.D. N.D. -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.2 N.D. N.D. N.D. -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.8 N.D. N.D. N.D. -2.9
carbon source succinate (C) -4.9 N.D. N.D. N.D. -0.7
nitrogen source Uridine (N) -5.5 N.D. N.D. N.D. +0.3
nitrogen source Thymine (N) -5.3 N.D. N.D. N.D. +0.6
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