Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS08085	BWI76_RS08090	BWI76_RS08095	BWI76_RS08100	BWI76_RS08105
nitrogen source	L-aspartic (N)	+0.1	-0.4	-2.8	-2.6	-2.5
carbon source	L-Glutamine (C)	+0.1	+0.0	-3.0	-2.6	-2.1
nitrogen source	L-Glutamic (N)	-0.0	-0.1	-2.8	-2.0	-2.0
nitrogen source	L-Glutamic (N)	-0.0	-0.2	-2.3	-1.7	-2.1
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x	-0.3	-0.5	-0.5	-0.8	-0.7
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	-0.2	-0.3	-1.2	-0.6
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.3	-0.3	-0.2	-0.6	-0.8
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.2	-0.5	-0.1	-0.5	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.5	-0.3	-0.5	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	-0.3	-0.4	-0.2	-0.8	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	-0.5	-0.7	-0.0	-0.7
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	-0.5	-0.1	-0.5	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.7	-0.4	-0.2	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.2	-0.4	-0.4	-0.6	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.3	-0.7	-0.1	-0.4	-0.5
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	-0.3	-0.2	-0.8	-0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	-0.3	-0.3	-0.8	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.3	-0.3	-0.4	-0.1	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.3	-0.6	-0.3	-0.4	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.3	-0.5	-0.1	-0.1	-0.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.3	-0.2	-0.6	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.5	-0.1	-0.4	-0.3
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.1	-0.5	+0.1	+0.1	-1.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.2	-0.0	-0.3	-1.4	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	-0.5	+0.2	+0.1	-0.9
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.4	-1.4	+0.1	-0.0	+0.4
nitrogen source	Gly-DL-Asp (N)	-0.3	-0.4	+0.5	+0.6	+0.4
phage	KLEB24 MOI 1	+0.3	+0.2	+0.2	+0.5	+0.6
phage	KLEB16 MOI 10	+0.0	+0.4	+0.5	+0.2	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.3	+0.6	+0.8	+0.3