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Homologs
Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS07795 and BWI76_RS07800 are separated by 160 nucleotides
BWI76_RS07800 and BWI76_RS07805 overlap by 4 nucleotides
BWI76_RS07805 and BWI76_RS07810 are separated by 20 nucleotides
BWI76_RS07810 and BWI76_RS07815 overlap by 4 nucleotides
BWI76_RS07795: BWI76_RS07795 - oxidoreductase, at 1,651,747 to 1,652,835
_RS07795
BWI76_RS07800: BWI76_RS07800 - ABC transporter, at 1,652,996 to 1,654,498
_RS07800
BWI76_RS07805: BWI76_RS07805 - sugar ABC transporter permease, at 1,654,495 to 1,655,493
_RS07805
BWI76_RS07810: BWI76_RS07810 - sugar ABC transporter periplasmic sugar-binding protein, at 1,655,514 to 1,656,578
_RS07810
BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816
_RS07815
Group
Condition
BWI76
_RS07795
BWI76
_RS07800
BWI76
_RS07805
BWI76
_RS07810
BWI76
_RS07815
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.1
-1.1
-0.7
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.3
-0.3
-0.7
-0.5
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
+0.3
-0.8
-0.6
+0.1
-0.4
phage
KLEB20 MOI 1
-0.4
+0.6
-1.2
-0.1
-0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.4
-0.0
-1.1
-0.2
-0.5
nitrogen source
L-Cysteine (N)
+0.5
-0.5
-0.8
+0.0
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.4
-0.8
-0.7
+1.1
phage
K. M5a1 KLEB23 MOI 10
+0.8
-0.4
+0.0
-0.8
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
+0.5
-0.3
-0.8
-0.3
+0.2
nitrogen source
Glucuronamide (N)
+0.5
+0.1
-1.7
+0.6
-0.1
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
-0.1
+0.1
+0.7
+0.2
-1.1
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
+0.2
-0.4
+0.7
+0.3
-0.6
agar plate interaction
Taped volatile agar plate with Trichoderma atroviridae IMI
+0.3
-0.1
-0.6
+1.0
-0.3
nitrogen source
L-Arginine (N)
+0.3
+0.0
+0.5
+0.4
-0.9
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.5
-0.2
-0.8
+0.2
+0.7
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
-0.2
+0.7
+1.0
-0.4
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.7
+0.9
+1.2
-0.7
mixed community
RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.5
+0.5
-0.5
+0.5
+0.2
phage
K. M5a1 KLEB10 MOI 1
+0.4
+0.3
+0.9
-0.1
-0.3
ecofab
LB in EcoFAB_10mL
+0.2
-0.3
+1.3
+0.7
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.2
-0.4
+0.8
+0.7
carbon source
L-Glutamine (C)
+0.1
+0.1
-0.4
+0.2
+1.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.3
+0.8
-0.6
+1.1
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
+0.6
+0.3
+0.8
-0.3
+0.4
stress
Cobalt chloride 0.5 mM
+0.2
+1.1
+0.5
+0.4
-0.2
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+0.4
+0.4
+0.9
+0.5
-0.2
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
+0.2
+0.4
+1.1
+0.5
+0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.3
+0.2
+1.0
+0.7
+0.3
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+0.2
+0.6
+1.5
+0.7
-0.3
carbon source
Gly-Glu (C)
+1.4
-0.2
+0.8
+0.5
+0.3
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