Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS07795 and BWI76_RS07800 are separated by 160 nucleotidesBWI76_RS07800 and BWI76_RS07805 overlap by 4 nucleotidesBWI76_RS07805 and BWI76_RS07810 are separated by 20 nucleotidesBWI76_RS07810 and BWI76_RS07815 overlap by 4 nucleotides BWI76_RS07795: BWI76_RS07795 - oxidoreductase, at 1,651,747 to 1,652,835 _RS07795 BWI76_RS07800: BWI76_RS07800 - ABC transporter, at 1,652,996 to 1,654,498 _RS07800 BWI76_RS07805: BWI76_RS07805 - sugar ABC transporter permease, at 1,654,495 to 1,655,493 _RS07805 BWI76_RS07810: BWI76_RS07810 - sugar ABC transporter periplasmic sugar-binding protein, at 1,655,514 to 1,656,578 _RS07810 BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816 _RS07815
Group Condition BWI76_RS07795 BWI76_RS07800 BWI76_RS07805 BWI76_RS07810 BWI76_RS07815
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.1 -1.1 -0.7 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 -0.3 -0.7 -0.5 -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 -0.8 -0.6 +0.1 -0.4
phage KLEB20 MOI 1 -0.4 +0.6 -1.2 -0.1 -0.3
carbon source D-Glucosamine Hydrochloride (C) +0.4 -0.0 -1.1 -0.2 -0.5
nitrogen source L-Cysteine (N) +0.5 -0.5 -0.8 +0.0 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.4 -0.8 -0.7 +1.1
phage K. M5a1 KLEB23 MOI 10 +0.8 -0.4 +0.0 -0.8 -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 -0.3 -0.8 -0.3 +0.2
nitrogen source Glucuronamide (N) +0.5 +0.1 -1.7 +0.6 -0.1
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.1 +0.1 +0.7 +0.2 -1.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 -0.4 +0.7 +0.3 -0.6
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.1 -0.6 +1.0 -0.3
nitrogen source L-Arginine (N) +0.3 +0.0 +0.5 +0.4 -0.9
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 -0.2 -0.8 +0.2 +0.7
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.2 +0.7 +1.0 -0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.7 +0.9 +1.2 -0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.5 +0.5 -0.5 +0.5 +0.2
phage K. M5a1 KLEB10 MOI 1 +0.4 +0.3 +0.9 -0.1 -0.3
ecofab LB in EcoFAB_10mL +0.2 -0.3 +1.3 +0.7 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.2 -0.4 +0.8 +0.7
carbon source L-Glutamine (C) +0.1 +0.1 -0.4 +0.2 +1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 +0.8 -0.6 +1.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +0.6 +0.3 +0.8 -0.3 +0.4
stress Cobalt chloride 0.5 mM +0.2 +1.1 +0.5 +0.4 -0.2
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.4 +0.4 +0.9 +0.5 -0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.2 +0.4 +1.1 +0.5 +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.3 +0.2 +1.0 +0.7 +0.3
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.2 +0.6 +1.5 +0.7 -0.3
carbon source Gly-Glu (C) +1.4 -0.2 +0.8 +0.5 +0.3
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