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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS07600 and BWI76_RS07605 are separated by 186 nucleotides
BWI76_RS07605 and BWI76_RS07610 are separated by 49 nucleotides
BWI76_RS07610 and BWI76_RS07615 are separated by 14 nucleotides
BWI76_RS07615 and BWI76_RS07620 are separated by 10 nucleotides
BWI76_RS07600: BWI76_RS07600 - aspartate aminotransferase family protein, at 1,609,190 to 1,610,527
_RS07600
BWI76_RS07605: BWI76_RS07605 - N-acetyltransferase GCN5, at 1,610,714 to 1,611,409
_RS07605
BWI76_RS07610: BWI76_RS07610 - choline dehydrogenase, at 1,611,459 to 1,613,123
_RS07610
BWI76_RS07615: BWI76_RS07615 - betaine-aldehyde dehydrogenase, at 1,613,138 to 1,614,610
_RS07615
BWI76_RS07620: BWI76_RS07620 - transcriptional regulator BetI, at 1,614,621 to 1,615,214
_RS07620
Group
Condition
BWI76
_RS07600
BWI76
_RS07605
BWI76
_RS07610
BWI76
_RS07615
BWI76
_RS07620
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-1.3
-0.4
+0.2
-1.5
phage
K. M5a1 KLEB26 MOI 0.1
+0.3
-2.6
+0.0
-0.2
-0.2
phage
KLEB26 MOI0.1
+0.0
-0.7
-0.2
-0.6
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.3
-1.3
-0.7
+1.0
-0.8
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-1.0
-0.3
+0.0
+0.3
-0.9
stress
Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
-0.1
-0.7
-0.0
+0.2
-1.3
phage
KLEB17 MOI 1
-0.4
+0.1
+0.3
-0.7
-1.1
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
-0.2
-1.2
-0.3
-0.2
+0.3
supernatant control
Vogels_fungal_media; pH 5.5
-0.5
-0.9
-0.4
+0.1
+0.4
nitrogen source
L-Lysine (N)
+0.5
-0.5
-0.9
-0.2
+0.3
phage
KLEB16 MOI 0.1
+0.3
-0.8
-0.2
-0.6
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
-0.7
-0.8
+0.1
+0.4
phage
KLEB1 MOI 10
+0.9
-0.2
+0.1
-0.2
-0.9
phage
KLEB13 MOI 0.1
+0.4
-0.2
-1.0
+0.4
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.3
+0.8
-0.5
-0.4
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
+0.2
+0.8
-0.9
-0.4
+0.7
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
-0.3
+0.2
-0.2
-0.4
+1.2
nitrogen source
Gly-DL-Asp (N)
-0.2
+1.1
-0.3
-0.4
+0.4
nitrogen source
L-tyrosine (N)
+1.0
-0.1
+0.8
-0.7
-0.1
phage
K. M5a1 KLEB23 MOI 10
+0.5
+1.0
-0.5
+0.6
-0.2
phage
KLEB17 MOI 1
+0.4
+0.4
+0.9
+0.3
-0.5
stress
Sisomicin 0.008 mg/ml
+0.1
+2.1
-0.5
-0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-0.4
+0.8
+0.6
+0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.9
+0.3
+0.7
-0.2
+0.3
phage
K. M5a1 KLEB10 MOI 10
+0.9
+1.3
-0.2
-0.2
+0.3
phage
K. M5a1 KLEB22 MOI 10
+0.3
-0.6
+0.7
+0.8
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+1.8
+0.5
-0.5
-0.0
+0.4
stress
Sisomicin 0.008 mg/ml
+0.2
+1.9
+0.0
-0.0
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
+0.6
-0.1
+0.4
+1.1
phage
K. M5a1 KLEB23 MOI 1
+0.5
+0.8
+0.6
+0.2
+0.9
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