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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS07440 and BWI76_RS07445 are separated by 76 nucleotides
BWI76_RS07445 and BWI76_RS07450 are separated by 109 nucleotides
BWI76_RS07450 and BWI76_RS07455 are separated by 265 nucleotides
BWI76_RS07455 and BWI76_RS07460 are separated by 118 nucleotides
BWI76_RS07440: BWI76_RS07440 - miniconductance mechanosensitive channel, at 1,569,800 to 1,571,044
_RS07440
BWI76_RS07445: BWI76_RS07445 - MFS transporter, at 1,571,121 to 1,572,548
_RS07445
BWI76_RS07450: BWI76_RS07450 - transcriptional regulator, at 1,572,658 to 1,573,524
_RS07450
BWI76_RS07455: BWI76_RS07455 - NAD(P)H nitroreductase, at 1,573,790 to 1,574,443
_RS07455
BWI76_RS07460: BWI76_RS07460 - hypothetical protein, at 1,574,562 to 1,574,930
_RS07460
Group
Condition
BWI76
_RS07440
BWI76
_RS07445
BWI76
_RS07450
BWI76
_RS07455
BWI76
_RS07460
phage
KLEB29 MOI 1
+0.4
-0.0
-0.9
-1.0
-0.5
phage
K. M5a1 KLEB23 MOI 10
+0.4
-0.6
+0.1
-0.8
-0.9
phage
KLEB30 MOI 1
+0.5
-0.2
-0.4
-0.5
-0.9
phage
KLEB17 MOI 0.1
-0.4
+0.2
+0.4
-0.4
-1.1
phage
KLEB20 MOI 0.1
+0.2
-0.1
-0.5
+0.2
-1.0
carbon source
L-Sorbose (C)
+0.0
-0.3
-1.0
-0.0
+0.5
mixed community
LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
+0.2
+0.3
-0.9
+0.2
-0.4
nitrogen source
Cytosine (N)
+0.1
+0.6
-0.1
-0.8
-0.3
nitrogen source
L-tyrosine (N)
+0.0
-0.3
-0.9
+0.1
+0.6
supernatant control:fungal media
R2A with Vogels_fungal_media 0.2X
+0.0
+0.2
-0.8
-0.4
+0.6
agar plate interaction
Taped volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.3
-0.9
+0.7
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.3
+0.8
-0.6
-0.1
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.1
+0.4
-0.9
-0.3
+0.4
nitrogen source
L-aspartic (N)
+0.1
+0.6
-1.3
+0.3
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.2
+0.3
-1.1
+0.2
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+0.7
+0.2
+0.3
-0.1
-0.9
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
+0.4
-0.0
-1.2
+0.7
+0.5
stress
Paraquat dichloride 0.1 mg/ml
+0.3
+0.2
+0.5
-0.9
+0.5
control
NoPredeControl
-0.1
+0.6
+0.3
+0.6
-0.4
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
+0.1
-0.5
+0.5
+0.0
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.0
-0.6
+0.2
+1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.4
+0.4
+0.5
-0.5
phage
K. M5a1 KLEB26 MOI 0.1
+0.6
+0.4
+0.3
-0.6
+0.5
phage
KLEB17 MOI 1
+0.5
+0.2
+0.7
+0.1
-0.3
stress
perchlorate 100 mM
+0.1
-0.1
+1.2
-0.3
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
-0.3
-0.4
+0.7
+1.1
nitrogen source
L-Arginine (N)
+0.2
-0.1
+0.9
+0.3
+0.5
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
+0.1
+0.3
+0.5
-0.0
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.1
+0.1
+2.4
+0.3
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.3
+1.0
-0.3
+1.8
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