Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

Or view all 610 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BWI76_RS07255	BWI76_RS07260	BWI76_RS07265	BWI76_RS07270	BWI76_RS07275
phage	K. M5a1 KLEB26 MOI 0.1	-0.5	+0.5	-1.8	-0.0	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-1.0	-1.1	+0.1	+0.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.8	-0.7	-0.6	+0.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7	-0.6	-0.0	+0.7	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3	-0.3	-0.3	+0.1	+0.2
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-1.3	-0.1	+0.5	+0.2	-0.7
nitrogen source	Casamino Acids (N)	-0.8	-0.7	+0.7	-0.1	-0.0
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	-0.5	-0.8	-0.4	+0.2
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.2	-0.6	-0.3	+0.6	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.3	+0.2	+0.4	+0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	-0.2	+0.8	+0.2	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.4	+0.5	+0.8	-0.4	+0.3
ecofab	LB in EcoFAB_3.5mL	+0.2	+1.0	-0.7	-0.2	-0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.8	-0.3	+0.1	+0.3	+1.1
nitrogen source	Cytosine (N)	-1.3	+0.2	+0.9	+0.4	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+1.1	-0.8	+0.4	-0.2	+0.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.5	+0.2	+0.6	+0.5	-0.7
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+2.0	-0.4	+0.0	-0.3	-0.1
nitrogen source	D-Alanine (N)	+0.7	-0.3	+0.9	-0.4	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.6	+0.6	+0.9	-0.7	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.9	-0.3	+0.2	-0.1	-0.2
nitrogen source	L-Phenylalanine (N)	+0.6	-0.4	+0.8	+0.4	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+1.3	+0.0	-0.4	+0.6	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+1.1	-0.6	+0.7	+0.3	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+1.6	+0.1	+0.4	+0.2	-0.1
phage	K. M5a1 KLEB10 MOI 1	+0.8	+0.2	+0.6	+0.3	+0.3
phage	KLEB17 MOI 1	+0.8	+1.1	-0.1	+0.5	-0.0
phage	KLEB17 MOI 1	+0.0	+0.9	+0.8	+0.3	+0.3
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.1	+0.5	+1.4	+0.4	+0.3
stress	Sisomicin 0.008 mg/ml	+2.7	+0.8	+0.3	+0.3	+0.0