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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS07200 and BWI76_RS07205 are separated by 267 nucleotides
BWI76_RS07205 and BWI76_RS07210 are separated by 148 nucleotides
BWI76_RS07210 and BWI76_RS07215 are separated by 149 nucleotides
BWI76_RS07215 and BWI76_RS07220 are separated by 162 nucleotides
BWI76_RS07200: BWI76_RS07200 - MFS transporter, at 1,513,834 to 1,515,318
_RS07200
BWI76_RS07205: BWI76_RS07205 - lysine--tRNA ligase, at 1,515,586 to 1,517,103
_RS07205
BWI76_RS07210: BWI76_RS07210 - hypothetical protein, at 1,517,252 to 1,517,665
_RS07210
BWI76_RS07215: BWI76_RS07215 - class A extended-spectrum beta-lactamase OXY-6-4, at 1,517,815 to 1,518,690
_RS07215
BWI76_RS07220: BWI76_RS07220 - oxidoreductase NAD-binding protein, at 1,518,853 to 1,519,884
_RS07220
Group
Condition
BWI76
_RS07200
BWI76
_RS07205
BWI76
_RS07210
BWI76
_RS07215
BWI76
_RS07220
stress
Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
-0.1
+0.1
-0.0
-3.2
-0.2
stress
Cephalothin 0.16 mg/ml
-0.1
+0.1
+0.0
-3.2
+0.3
stress
Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
-0.1
-0.1
-0.1
-2.5
-0.2
stress
Cephalothin 0.16 mg/ml
-0.4
-0.4
+0.1
-2.5
+0.8
phage
K. M5a1 KLEB22 MOI 10
-0.9
-0.3
+0.0
-0.1
-0.7
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
-0.7
+0.2
-1.1
-0.3
-0.0
nitrogen source
Thymine (N)
-0.3
-0.4
-0.2
-0.3
-0.4
phage
KLEB29 MOI 1
-0.5
+0.1
-0.2
-0.3
-0.7
nitrogen source
L-Arginine (N)
-0.5
-0.6
-0.2
-0.3
+0.1
supernatant control
Vogels_fungal_media; pH 5.5
+0.3
-0.4
-0.4
-0.2
-0.5
mixed community
LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
-0.5
-0.3
-0.0
+0.4
-0.6
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
-0.3
-0.5
-0.0
-0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.1
-0.6
-0.1
-0.4
+0.4
nitrogen source
Glucuronamide (N)
+0.5
-0.1
-0.2
-0.3
-0.6
micoeukaryotes
Tetrahymena sp., Mixed culture-1
-0.4
-0.1
-0.4
+0.3
+0.5
stress
Sisomicin 0.008 mg/ml
+0.6
+0.3
+0.0
-0.5
-0.4
phage
KLEB31 MOI 1
+0.4
+0.3
+0.2
-0.5
-0.3
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
-0.5
+0.4
+0.2
-0.2
+0.4
micoeukaryotes
Acanthamoeba sp., muxed culture-2
-0.5
+0.7
-0.1
+0.5
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.7
-0.1
-0.2
+0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB
+0.7
+0.2
-0.3
+0.2
-0.3
nitrogen source
nitrate (N)
+0.3
+0.8
-0.1
-0.2
-0.3
rhizosphere
rhizosphere sample 1; outgrowth in LB
+0.6
+0.2
-0.6
-0.2
+0.6
stress
RCH2_defined_1percent_glucose with Chloride 600 mM
+0.1
+1.2
-0.3
-0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.8
-0.4
+0.2
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
+0.3
-0.6
+0.8
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.2
-0.3
-0.0
+0.6
+0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.1
-0.2
+0.4
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
+1.0
+0.0
+0.3
+0.4
+0.2
stress
RCH2_defined_1percent_glucose with Chloride 600 mM
+0.9
+1.5
-0.1
-0.0
-0.4
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