Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS07090 and BWI76_RS07095 are separated by 137 nucleotidesBWI76_RS07095 and BWI76_RS07100 overlap by 1 nucleotidesBWI76_RS07100 and BWI76_RS07105 are separated by 340 nucleotidesBWI76_RS07105 and BWI76_RS07110 are separated by 363 nucleotides BWI76_RS07090: BWI76_RS07090 - cysteine--tRNA ligase, at 1,490,052 to 1,491,437 _RS07090 BWI76_RS07095: BWI76_RS07095 - ribosome-associated protein, at 1,491,575 to 1,491,787 _RS07095 BWI76_RS07100: BWI76_RS07100 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, at 1,491,787 to 1,492,653 _RS07100 BWI76_RS07105: BWI76_RS07105 - tRNA-Arg, at 1,492,994 to 1,493,070 _RS07105 BWI76_RS07110: BWI76_RS07110 - DNA-binding protein, at 1,493,434 to 1,493,891 _RS07110
Group Condition BWI76_RS07090 BWI76_RS07095 BWI76_RS07100 BWI76_RS07105 BWI76_RS07110
nitrogen source Glucuronamide (N) N.D. -0.6 N.D. N.D. -1.2
nitrogen source Uridine (N) N.D. -0.4 N.D. N.D. -1.3
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. +0.1 N.D. N.D. -1.7
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. -1.3 N.D. N.D. -0.3
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days N.D. -0.9 N.D. N.D. -0.7
nitrogen source Gly-DL-Asp (N) N.D. -0.2 N.D. N.D. -1.3
nitrogen source Cytosine (N) N.D. -0.7 N.D. N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.9 N.D. N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.7 N.D. N.D. -0.7
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL N.D. -0.5 N.D. N.D. -0.8
nitrogen source nitrate (N) N.D. -0.6 N.D. N.D. -0.7
nitrogen source L-Lysine (N) N.D. -0.7 N.D. N.D. -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.6 N.D. N.D. -0.7
phage KLEB15 MOI 10 N.D. -0.5 N.D. N.D. -0.7
nitrogen source L-Arginine (N) N.D. -0.5 N.D. N.D. -0.7
carbon source Trisodium citrate (C) N.D. -0.8 N.D. N.D. -0.4
nitrogen source Thymidine (N) N.D. -0.2 N.D. N.D. -1.0
phage KLEB15 MOI 0.1 N.D. -1.0 N.D. N.D. +0.3
phage KLEB16 MOI 0.1 N.D. +0.3 N.D. N.D. -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.8 N.D. N.D. -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.9 N.D. N.D. +0.5
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. +0.6 N.D. N.D. -1.0
phage KLEB20 MOI 1 N.D. +0.7 N.D. N.D. -1.0
phage KLEB20 MOI 0.1 N.D. +0.6 N.D. N.D. -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.9 N.D. N.D. +2.0
phage K. M5a1 KLEB23 MOI 1 N.D. +0.3 N.D. N.D. +0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.6 N.D. N.D. +0.7
stress perchlorate 100 mM N.D. +1.4 N.D. N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.8 N.D. N.D. +0.6
ecofab LB in EcoFAB_3.5mL N.D. +1.4 N.D. N.D. +0.1
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