Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS06965 and BWI76_RS06970 are separated by 106 nucleotidesBWI76_RS06970 and BWI76_RS06975 are separated by 87 nucleotidesBWI76_RS06975 and BWI76_RS06980 are separated by 210 nucleotidesBWI76_RS06980 and BWI76_RS06985 are separated by 91 nucleotides BWI76_RS06965: BWI76_RS06965 - membrane protein, at 1,462,636 to 1,463,781 _RS06965 BWI76_RS06970: BWI76_RS06970 - selenophosphate-dependent tRNA 2-selenouridine synthase, at 1,463,888 to 1,464,973 _RS06970 BWI76_RS06975: BWI76_RS06975 - DNA-binding transcriptional activator AllS, at 1,465,061 to 1,465,984 _RS06975 BWI76_RS06980: BWI76_RS06980 - ureidoglycolate lyase, at 1,466,195 to 1,466,677 _RS06980 BWI76_RS06985: BWI76_RS06985 - transcriptional regulator, at 1,466,769 to 1,467,587 _RS06985
Group Condition BWI76_RS06965 BWI76_RS06970 BWI76_RS06975 BWI76_RS06980 BWI76_RS06985
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -0.2 -0.1 -0.7 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -0.3 -0.1 -0.6 N.D.
phage K. M5a1 KLEB23 MOI 10 -0.8 -0.7 +0.1 -0.4 N.D.
phage KLEB29 MOI 1 -0.9 -0.4 -0.4 +0.2 N.D.
phage K. M5a1 KLEB26 MOI 0.1 +0.2 -0.9 -0.4 -0.2 N.D.
stress Cephalothin 0.16 mg/ml +0.4 -0.1 -0.3 -0.8 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.1 +0.4 -0.9 -0.3 N.D.
phage KLEB29 MOI 0.1 -0.4 +0.2 -0.7 +0.2 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.2 -0.4 -0.7 +0.3 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.0 +0.0 +0.5 -1.0 N.D.
nitrogen source Glucuronamide (N) +0.7 +0.3 -0.6 -0.9 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.3 +0.1 +0.3 -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.8 +1.1 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -0.2 -0.3 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.5 +0.8 -1.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 -0.3 +0.8 -0.4 N.D.
nitrogen source L-Proline (N) +0.3 -0.6 +0.5 +0.3 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM +0.3 +0.6 -0.5 +0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.1 +0.7 +0.1 +0.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml +0.5 +0.5 +0.1 +0.4 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.4 -0.3 +1.2 +0.3 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL +0.3 +0.1 +0.5 +0.7 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.3 +0.5 +0.2 +0.6 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.3 +0.5 +0.4 +0.5 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.5 +0.3 +0.4 +0.6 N.D.
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days +0.1 +1.0 +0.1 +0.8 N.D.
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.3 +0.8 +0.1 +0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.3 -0.2 +5.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 +0.0 -0.2 +5.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.3 +0.3 +6.8 N.D.
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