Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS06840 and BWI76_RS06845 are separated by 127 nucleotidesBWI76_RS06845 and BWI76_RS06850 are separated by 63 nucleotidesBWI76_RS06850 and BWI76_RS06855 are separated by 42 nucleotidesBWI76_RS06855 and BWI76_RS06860 are separated by 233 nucleotides BWI76_RS06840: BWI76_RS06840 - adenylate kinase, at 1,435,149 to 1,435,793 _RS06840 BWI76_RS06845: BWI76_RS06845 - ferrochelatase, at 1,435,921 to 1,436,883 _RS06845 BWI76_RS06850: BWI76_RS06850 - inosine/guanosine kinase, at 1,436,947 to 1,438,251 _RS06850 BWI76_RS06855: BWI76_RS06855 - Kef family K(+) transporter, at 1,438,294 to 1,439,970 _RS06855 BWI76_RS06860: BWI76_RS06860 - MFS transporter, at 1,440,204 to 1,441,424 _RS06860
Group Condition BWI76_RS06840 BWI76_RS06845 BWI76_RS06850 BWI76_RS06855 BWI76_RS06860
phage K. M5a1 KLEB26 MOI 0.1 N.D. N.D. -0.7 -0.5 -0.6
phage KLEB17 MOI 1 N.D. N.D. -0.7 -0.3 -0.4
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. -0.9 +0.0 -0.4
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. -1.0 +0.0 -0.2
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. -0.6 -0.3 -0.3
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. -0.9 +0.0 -0.3
nitrogen source Uridine (N) N.D. N.D. -0.8 -0.3 -0.0
nitrogen source L-Arginine (N) N.D. N.D. -0.4 -0.4 -0.2
stress Cobalt chloride 0.5 mM N.D. N.D. -0.7 -0.3 +0.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. N.D. -0.7 -0.3 +0.4
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. -0.8 +0.0 +0.2
supernatant control Vogels_fungal_media; pH 5.5 N.D. N.D. -0.7 +0.1 +0.1
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. N.D. -0.6 +0.3 -0.1
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL N.D. N.D. +0.3 -0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.3 +0.3 -0.4
phage KLEB15 MOI 10 N.D. N.D. +0.3 -0.4 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. -0.7 +0.4 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.6 +0.5 -0.2
stress Sisomicin 0.008 mg/ml N.D. N.D. -0.9 +0.7 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.4 +0.6 -0.4
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. N.D. +0.3 -0.5 +0.2
phage KLEB15 MOI 0.1 N.D. N.D. +0.5 -0.1 -0.3
stress Sisomicin 0.008 mg/ml N.D. N.D. -0.9 +0.7 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x N.D. N.D. +0.4 +0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +0.7 -0.4 +0.1
stress nitrite 20 mM N.D. N.D. +0.6 +0.2 -0.2
stress Cobalt chloride 0.5 mM N.D. N.D. -0.2 +0.5 +0.4
phage KLEB16 MOI 10 N.D. N.D. +0.6 +0.3 -0.2
phage KLEB20 MOI 1 N.D. N.D. +0.7 +0.2 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +1.2 -0.1 +0.3
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