Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS06820 and BWI76_RS06825 are separated by 57 nucleotidesBWI76_RS06825 and BWI76_RS06830 overlap by 1 nucleotidesBWI76_RS06830 and BWI76_RS06835 are separated by 111 nucleotidesBWI76_RS06835 and BWI76_RS06840 are separated by 176 nucleotides BWI76_RS06820: BWI76_RS06820 - DNA polymerase III subunit gamma/tau, at 1,430,090 to 1,431,991 _RS06820 BWI76_RS06825: BWI76_RS06825 - nucleoid-associated protein, YbaB/EbfC family, at 1,432,049 to 1,432,381 _RS06825 BWI76_RS06830: BWI76_RS06830 - recombination protein RecR, at 1,432,381 to 1,432,986 _RS06830 BWI76_RS06835: BWI76_RS06835 - molecular chaperone HtpG, at 1,433,098 to 1,434,972 _RS06835 BWI76_RS06840: BWI76_RS06840 - adenylate kinase, at 1,435,149 to 1,435,793 _RS06840
Group Condition BWI76_RS06820 BWI76_RS06825 BWI76_RS06830 BWI76_RS06835 BWI76_RS06840
nitrogen source L-Arginine (N) N.D. N.D. -1.4 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. -1.6 +0.0 N.D.
stress Benzalkonium Chloride 0.004mg/ml N.D. N.D. -1.0 -0.5 N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.9 -0.6 N.D.
stress Benzalkonium Chloride 0.006ng/ml N.D. N.D. -1.0 -0.5 N.D.
phage KLEB20 MOI 1 N.D. N.D. -1.4 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -1.1 -0.3 N.D.
carbon source D-Lactate (C) N.D. N.D. -1.0 -0.4 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. N.D. -0.7 -0.7 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. -1.1 -0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. -0.8 -0.6 N.D.
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.5 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -1.3 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -1.3 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. -1.0 -0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. -1.3 +0.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.5 +0.3 N.D.
stress RCH2_defined_1percent_glucose with Chloride 600 mM N.D. N.D. -1.3 +0.1 N.D.
phage KLEB30 MOI 1 N.D. N.D. -1.3 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. -1.2 +0.2 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. -1.3 +0.4 N.D.
nitrogen source L-Tryptophan (N) N.D. N.D. -1.0 +0.4 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. N.D. +0.7 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.7 +0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.8 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -0.9 +1.1 N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. N.D. -0.5 +0.9 N.D.
phage K. M5a1 KLEB26 MOI 0.1 N.D. N.D. +0.9 -0.4 N.D.
stress Sisomicin 0.008 mg/ml N.D. N.D. -0.2 +1.4 N.D.
carbon source Gly-Glu (C) N.D. N.D. +1.3 +0.0 N.D.
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