Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS06560 and BWI76_RS06565 are separated by 66 nucleotidesBWI76_RS06565 and BWI76_RS06570 are separated by 126 nucleotidesBWI76_RS06570 and BWI76_RS06575 are separated by 47 nucleotidesBWI76_RS06575 and BWI76_RS06580 are separated by 115 nucleotides BWI76_RS06560: BWI76_RS06560 - 7-cyano-7-deazaguanine synthase QueC, at 1,378,852 to 1,379,547 _RS06560 BWI76_RS06565: BWI76_RS06565 - putative periplasmic solute-binding protein, at 1,379,614 to 1,381,314 _RS06565 BWI76_RS06570: BWI76_RS06570 - thiamin pyrimidine pyrophosphate hydrolase, at 1,381,441 to 1,382,259 _RS06570 BWI76_RS06575: BWI76_RS06575 - cysteine synthase, at 1,382,307 to 1,383,359 _RS06575 BWI76_RS06580: BWI76_RS06580 - transcriptional regulator, at 1,383,475 to 1,383,933 _RS06580
Group Condition BWI76_RS06560 BWI76_RS06565 BWI76_RS06570 BWI76_RS06575 BWI76_RS06580
nitrogen source L-Cysteine (N) +0.7 +0.2 -0.4 -3.3 N.D.
nitrogen source L-Cysteine (N) -0.3 +0.0 +0.4 -2.6 N.D.
phage KLEB13 MOI 0.1 -1.6 +0.1 -0.3 -0.2 N.D.
carbon source D-Glucose-6-Phosphate (C) -0.5 -0.4 -1.1 +0.1 N.D.
carbon source acetate (C) -1.3 -0.2 -0.3 +0.2 N.D.
phage KLEB17 MOI 1 +0.5 -0.8 -0.5 -0.4 N.D.
nitrogen source D-Alanine (N) -0.7 +0.3 -0.9 +0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -0.2 +0.4 +0.3 N.D.
supernatant control Vogels_fungal_media; pH 5.5 +0.8 -0.2 -0.7 -0.5 N.D.
nitrogen source Thymine (N) +0.5 +0.4 -1.1 -0.3 N.D.
stress Cobalt chloride 0.5 mM -0.7 -0.3 -0.5 +1.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 +0.4 -0.5 +0.7 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.9 -0.2 +1.0 +0.1 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.7 +0.4 -0.9 +0.1 N.D.
nitrogen source L-Arginine (N) +1.2 +0.3 -0.4 -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 -0.1 +0.5 -0.4 N.D.
stress Cobalt chloride 0.5 mM +0.6 +0.3 -0.8 +1.3 N.D.
nitrogen source nitrate (N) +1.0 -0.0 +0.7 -0.3 N.D.
stress Nickel (II) chloride 1.5 mM -0.5 +0.1 +0.1 +1.7 N.D.
stress Nickel (II) chloride 1.5 mM +0.0 -0.1 -0.5 +2.4 N.D.
phage KLEB29 MOI 0.1 +0.8 +0.5 +0.5 +0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +0.3 +0.1 +0.3 N.D.
phage KLEB29 MOI 1 +1.3 +0.6 +0.0 +0.4 N.D.
phage KLEB16 MOI 0.1 +0.7 +0.5 +0.6 +0.6 N.D.
phage K. M5a1 KLEB23 MOI 1 +0.8 +0.9 +0.4 +0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +1.5 +1.0 +0.1 +0.3 N.D.
phage KLEB24 MOI 1 +1.3 +0.9 +0.2 +0.5 N.D.
phage KLEB24 MOI 1 +1.5 +0.4 +0.5 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 +0.1 +3.4 +0.0 N.D.
phage KLEB29 MOI 1 +1.1 +1.0 +0.9 +0.6 N.D.
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