Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS06530	BWI76_RS06535	BWI76_RS06540	BWI76_RS06545	BWI76_RS06550
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-6.7	-6.4	+4.7	-2.9	+0.3
nitrogen source	L-Isoleucine (N)	-4.4	-2.1	-1.2	-0.6	+0.1
nitrogen source	L-Tryptophan (N)	-4.6	-1.7	-0.3	-0.6	+0.1
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-3.0	-3.1	-0.4	+0.4	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-2.8	-2.0	+0.6	-1.3	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.8	-5.6	+0.3	-0.4	-0.8
nitrogen source	L-Tryptophan (N)	-3.3	-2.8	+1.0	+0.5	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-3.3	-2.5	+1.1	+0.3	+0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-5.3	-0.4	+4.2	-1.8	-0.3
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-3.3	+3.1	-2.0	+0.1	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-1.5	-2.6	+1.6	+0.8	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+3.1	-2.4	-1.9	+0.3	-0.3
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-2.1	+3.2	-1.0	-0.4	-0.2
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-2.6	-1.8	+3.2	+1.5	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+3.6	-2.7	-1.0	+0.7	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+3.3	-1.9	-1.0	+0.5	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.3	-2.6	-0.5	-0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.0	-2.0	-0.6	+0.3	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.5	-3.1	-0.1	-0.1	-0.1
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+3.4	-3.0	+1.9	-0.8	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+3.7	-3.2	+1.3	+0.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+3.4	-2.2	+1.2	+0.3	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+3.4	-1.9	+1.0	+0.8	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+4.1	-2.1	+1.2	+0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+3.4	-1.3	+0.8	+0.6	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+3.6	-1.3	+1.8	+0.6	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+4.3	-1.7	+1.6	+0.4	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.8	-2.9	+6.6	-0.6	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+3.1	-2.5	+5.5	+0.5	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+4.4	-0.7	+5.6	+0.6	+0.0