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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS06150 and BWI76_RS06155 are separated by 226 nucleotides
BWI76_RS06155 and BWI76_RS06160 are separated by 88 nucleotides
BWI76_RS06160 and BWI76_RS06165 are separated by 90 nucleotides
BWI76_RS06165 and BWI76_RS06170 are separated by 46 nucleotides
BWI76_RS06150: BWI76_RS06150 - transcriptional regulator, at 1,292,507 to 1,293,499
_RS06150
BWI76_RS06155: BWI76_RS06155 - anti-adapter protein iraP, at 1,293,726 to 1,293,986
_RS06155
BWI76_RS06160: BWI76_RS06160 - alkaline phosphatase, at 1,294,075 to 1,295,505
_RS06160
BWI76_RS06165: BWI76_RS06165 - phosphate starvation-inducible protein PsiF, at 1,295,596 to 1,295,916
_RS06165
BWI76_RS06170: BWI76_RS06170 - pyrroline-5-carboxylate reductase, at 1,295,963 to 1,296,772
_RS06170
Group
Condition
BWI76
_RS06150
BWI76
_RS06155
BWI76
_RS06160
BWI76
_RS06165
BWI76
_RS06170
mixed community
RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.2
-0.1
-0.2
-1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.3
-0.1
+0.0
-1.0
N.D.
phage
K. M5a1 KLEB23 MOI 10
+0.3
-0.2
-0.1
-1.2
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.5
-0.4
-0.0
-0.3
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.1
-0.1
-0.5
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.1
+0.1
-0.7
N.D.
carbon source
Inosine (C)
-0.3
+0.1
+0.0
-0.7
N.D.
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.0
-0.3
+0.1
-0.6
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-0.4
+0.1
+0.2
-0.5
N.D.
stress
Sisomicin 0.008 mg/ml
-0.1
-0.2
-0.6
+0.5
N.D.
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
+0.4
-0.4
+0.1
-0.4
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
+0.4
+0.3
+0.1
N.D.
phage
KLEB15 MOI 10
-0.3
-0.0
-0.1
+0.7
N.D.
nitrogen source
L-tyrosine (N)
-0.2
-0.2
+0.1
+0.6
N.D.
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.3
-0.1
+0.2
+0.5
N.D.
nitrogen source
Glucuronamide (N)
-0.3
-0.1
+0.1
+0.7
N.D.
phage
K. M5a1 KLEB22 MOI 10
+0.4
-0.3
-0.2
+0.6
N.D.
phage
K. M5a1 KLEB22 MOI 1
+0.5
-0.2
-0.1
+0.3
N.D.
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
+0.3
-0.3
+0.1
+0.5
N.D.
stress
Sisomicin 0.008 mg/ml
+0.0
-0.4
-0.2
+1.2
N.D.
phage
K. M5a1 KLEB23 MOI 1
+0.5
-0.2
+0.2
+0.3
N.D.
supernatant control
Vogels_fungal_media; pH 5.5
+0.1
+0.2
-0.1
+0.7
N.D.
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+0.1
-0.1
+0.0
+0.9
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.3
+0.2
+0.7
N.D.
phage
K. M5a1 KLEB10 MOI 10
+0.2
+0.1
+0.3
+0.5
N.D.
carbon source
D,L-Malic Acid (C)
+1.2
+0.0
-0.1
+0.0
N.D.
carbon source
D,L-Malic Acid (C)
+1.2
-0.1
-0.1
+0.3
N.D.
mixed community
LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
+0.6
+0.1
+0.2
+0.4
N.D.
carbon source
Gly-Glu (C)
+0.2
-0.1
-0.1
+1.3
N.D.
nitrogen source
L-Arginine (N)
+0.4
-0.2
+0.1
+1.0
N.D.
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