Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS05985 and BWI76_RS05990 overlap by 1 nucleotidesBWI76_RS05990 and BWI76_RS05995 are separated by 20 nucleotidesBWI76_RS05995 and BWI76_RS06000 are separated by 366 nucleotidesBWI76_RS06000 and BWI76_RS06005 overlap by 4 nucleotides BWI76_RS05985: BWI76_RS05985 - branched-chain amino acid ABC transporter permease, at 1,255,492 to 1,256,541 _RS05985 BWI76_RS05990: BWI76_RS05990 - branched-chain amino acid ABC transporter permease, at 1,256,541 to 1,257,440 _RS05990 BWI76_RS05995: BWI76_RS05995 - branched-chain amino acid ABC transporter substrate-binding protein, at 1,257,461 to 1,258,597 _RS05995 BWI76_RS06000: BWI76_RS06000 - ethanolamine ammonia-lyase small subunit, at 1,258,964 to 1,259,740 _RS06000 BWI76_RS06005: BWI76_RS06005 - ethanolamine ammonia lyase large subunit, at 1,259,737 to 1,261,125 _RS06005
Group Condition BWI76_RS05985 BWI76_RS05990 BWI76_RS05995 BWI76_RS06000 BWI76_RS06005
nitrogen source L-Tryptophan (N) -2.6 -3.2 -2.7 -1.6 -1.5
nitrogen source L-Tryptophan (N) -2.6 -3.0 -2.3 -1.8 -1.5
nitrogen source L-Threonine (N) -3.3 -2.2 -2.6 -1.2 -1.2
nitrogen source L-Threonine (N) -1.5 -2.2 -3.5 -1.5 -1.2
nitrogen source L-Proline (N) -1.7 -2.0 -2.0 -0.7 -0.4
nitrogen source L-Proline (N) -1.3 -2.1 -1.4 -0.9 -0.7
nitrogen source L-Leucine (N) -1.4 -1.5 -0.7 -0.6 -0.9
nitrogen source L-Leucine (N) -1.5 -1.1 -0.8 -0.8 -0.8
nitrogen source L-tyrosine (N) -1.7 -0.8 -0.6 -0.6 -0.9
nitrogen source L-Isoleucine (N) -1.3 -1.5 -0.7 -0.5 -0.5
nitrogen source L-Isoleucine (N) -0.8 -1.0 -1.5 -0.6 -0.6
nitrogen source L-Serine (N) -1.7 -1.1 -0.9 -0.2 +0.1
nitrogen source L-Glutamic (N) -0.4 -1.3 -0.8 -0.4 -0.7
phage KLEB29 MOI 1 -0.1 -1.2 -0.5 -0.7 -0.9
nitrogen source L-Phenylalanine (N) -0.5 -1.1 -0.9 -0.5 -0.3
nitrogen source L-Glutamic (N) -0.8 -0.8 -0.8 -0.4 -0.3
nitrogen source L-Arginine (N) -1.2 -1.0 -0.4 -0.1 -0.3
phage KLEB29 MOI 1 -0.7 -0.9 -0.4 -0.3 -0.5
nitrogen source L-Citrulline (N) -1.0 -0.8 -0.3 -0.3 -0.2
phage KLEB24 MOI 1 -0.3 -0.9 -0.4 -0.3 -0.5
nitrogen source L-Cysteine (N) -1.1 -0.3 -0.7 -0.1 -0.1
nitrogen source L-Phenylalanine (N) -0.9 -0.5 -0.3 -0.3 -0.4
nitrogen source L-Valine (N) -0.7 -0.8 -0.5 -0.2 -0.1
nitrogen source Thymine (N) +0.5 -1.6 +0.1 -0.1 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.6 -0.3 +0.1 -0.6
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 +0.5 -0.7 +0.2 +0.4
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.3 -1.1 +0.8 +0.1 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 +0.7 +0.5 +0.0 +0.2
nitrogen source L-Lysine (N) +0.6 +0.3 +0.7 +0.4 +0.1
nitrogen source L-Lysine (N) +0.8 +0.3 +0.8 +0.5 +0.3
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