Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS05605 and BWI76_RS05610 overlap by 4 nucleotidesBWI76_RS05610 and BWI76_RS05615 overlap by 11 nucleotidesBWI76_RS05615 and BWI76_RS05620 are separated by 320 nucleotidesBWI76_RS05620 and BWI76_RS05625 are separated by 252 nucleotides BWI76_RS05605: BWI76_RS05605 - polysaccharide export protein, at 1,175,009 to 1,175,563 _RS05605 BWI76_RS05610: BWI76_RS05610 - capsular polysaccharide synthesis protein CpsB, at 1,175,560 to 1,176,846 _RS05610 BWI76_RS05615: BWI76_RS05615 - undecaprenyl-phosphate glucose phosphotransferase, at 1,176,836 to 1,178,239 _RS05615 BWI76_RS05620: BWI76_RS05620 - NAD-dependent succinate-semialdehyde dehydrogenase, at 1,178,560 to 1,180,008 _RS05620 BWI76_RS05625: BWI76_RS05625 - Zn-finger protein, at 1,180,261 to 1,180,512 _RS05625
Group Condition BWI76_RS05605 BWI76_RS05610 BWI76_RS05615 BWI76_RS05620 BWI76_RS05625
phage K. M5a1 KLEB22 MOI 10 -0.1 -0.5 -0.9 -0.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.5 -0.2 -0.2 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 -0.1 -0.4 -0.3 N.D.
phage K. M5a1 KLEB22 MOI 1 -0.2 -0.2 -0.8 -0.1 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 +0.1 -0.3 -0.6 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.1 -0.1 -0.6 N.D.
phage K. M5a1 KLEB22 MOI 10 -0.2 -0.5 -0.5 -0.1 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.1 -0.3 -0.3 N.D.
phage K. M5a1 KLEB23 MOI 1 -0.0 -0.2 -0.8 -0.2 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -0.0 -0.3 -0.6 N.D.
phage K. M5a1 KLEB23 MOI 10 -0.1 -0.2 -0.8 -0.1 N.D.
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM -0.3 -0.1 -0.2 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 -0.1 -0.3 -0.4 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 +0.0 -0.1 -0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -0.3 +0.1 -0.2 -0.5 N.D.
phage KLEB16 MOI 1 -0.3 -0.4 +0.1 -0.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 +0.2 -0.4 -0.5 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 +0.2 -0.5 -0.1 N.D.
phage KLEB17 MOI 1 -0.6 -0.1 -0.1 +0.1 N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.3 +0.2 -0.5 -0.2 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 +0.3 -0.1 -0.5 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x -0.1 +0.2 -0.3 -0.4 N.D.
phage K. M5a1 KLEB23 MOI 10 +0.0 -0.1 -0.7 +0.3 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.1 +0.4 -0.2 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.3 +0.1 +0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.4 +0.3 +0.4 N.D.
carbon source Gly-Glu (C) -0.2 +0.5 +0.1 +0.2 N.D.
phage K. M5a1 KLEB26 MOI 0.1 +0.0 +0.4 +0.6 -0.2 N.D.
stress Sisomicin 0.008 mg/ml +0.1 +0.0 +0.5 +0.4 N.D.
phage KLEB26 MOI0.1 +0.2 +0.2 +0.6 +0.3 N.D.
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