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Fitness for 5 genes in
Klebsiella michiganensis M5al
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500 nt
BWI76_RS05235 and BWI76_RS05240 overlap by 14 nucleotides
BWI76_RS05240 and BWI76_RS05245 are separated by 12 nucleotides
BWI76_RS05245 and BWI76_RS05250 are separated by 11 nucleotides
BWI76_RS05250 and BWI76_RS05255 are separated by 31 nucleotides
BWI76_RS05235: BWI76_RS05235 - hypothetical protein, at 1,102,474 to 1,102,714
_RS05235
BWI76_RS05240: BWI76_RS05240 - (2E,6E)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase, at 1,102,701 to 1,103,459
_RS05240
BWI76_RS05245: BWI76_RS05245 - phosphatidate cytidylyltransferase, at 1,103,472 to 1,104,329
_RS05245
BWI76_RS05250: BWI76_RS05250 - zinc metallopeptidase RseP, at 1,104,341 to 1,105,693
_RS05250
BWI76_RS05255: BWI76_RS05255 - outer membrane protein assembly factor BamA, at 1,105,725 to 1,108,154
_RS05255
Group
Condition
BWI76
_RS05235
BWI76
_RS05240
BWI76
_RS05245
BWI76
_RS05250
BWI76
_RS05255
nitrogen source
Glucuronamide (N)
-4.6
N.D.
N.D.
N.D.
N.D.
nitrogen source
Gly-DL-Asp (N)
-4.4
N.D.
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-4.1
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-4.1
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Taped volatile agar plate with Trichoderma atroviridae IMI
-3.9
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-3.9
N.D.
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-3.8
N.D.
N.D.
N.D.
N.D.
mixed community
LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
-3.8
N.D.
N.D.
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-3.8
N.D.
N.D.
N.D.
N.D.
phage
KLEB20 MOI 0.1
-3.5
N.D.
N.D.
N.D.
N.D.
phage
KLEB1 MOI 10
-3.5
N.D.
N.D.
N.D.
N.D.
micoeukaryotes
Tetrahymena sp., Mixed culture-1
-3.5
N.D.
N.D.
N.D.
N.D.
phage
K. M5a1 KLEB23 MOI 1
-3.3
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Arginine (N)
-3.0
N.D.
N.D.
N.D.
N.D.
mixed community
LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
-2.9
N.D.
N.D.
N.D.
N.D.
phage
KLEB15 MOI 10
-2.9
N.D.
N.D.
N.D.
N.D.
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-2.7
N.D.
N.D.
N.D.
N.D.
phage
KLEB15 MOI 1
-2.7
N.D.
N.D.
N.D.
N.D.
stress
RCH2_defined_1percent_glucose with Chloride 100 mM and Betaine 100 uM
-2.5
N.D.
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
-2.5
N.D.
N.D.
N.D.
N.D.
phage
KLEB15 MOI 10
-2.4
N.D.
N.D.
N.D.
N.D.
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
-2.4
N.D.
N.D.
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
-2.3
N.D.
N.D.
N.D.
N.D.
phage
KLEB15 MOI 0.1
-2.2
N.D.
N.D.
N.D.
N.D.
mixed community
RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-2.2
N.D.
N.D.
N.D.
N.D.
stress
A22 0.1 mg/ml
-2.2
N.D.
N.D.
N.D.
N.D.
phage
KLEB15 MOI 0.1
-2.2
N.D.
N.D.
N.D.
N.D.
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+2.2
N.D.
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.5 mM
+2.7
N.D.
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.5 mM
+4.2
N.D.
N.D.
N.D.
N.D.
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