Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS05220 and BWI76_RS05225 are separated by 205 nucleotidesBWI76_RS05225 and BWI76_RS05230 are separated by 226 nucleotidesBWI76_RS05230 and BWI76_RS05235 are separated by 15 nucleotidesBWI76_RS05235 and BWI76_RS05240 overlap by 14 nucleotides BWI76_RS05220: BWI76_RS05220 - UMP kinase, at 1,099,544 to 1,100,269 _RS05220 BWI76_RS05225: BWI76_RS05225 - ribosome-recycling factor, at 1,100,475 to 1,101,032 _RS05225 BWI76_RS05230: BWI76_RS05230 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 1,101,259 to 1,102,458 _RS05230 BWI76_RS05235: BWI76_RS05235 - hypothetical protein, at 1,102,474 to 1,102,714 _RS05235 BWI76_RS05240: BWI76_RS05240 - (2E,6E)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase, at 1,102,701 to 1,103,459 _RS05240
Group Condition BWI76_RS05220 BWI76_RS05225 BWI76_RS05230 BWI76_RS05235 BWI76_RS05240
nitrogen source Glucuronamide (N) N.D. N.D. N.D. -4.6 N.D.
nitrogen source Gly-DL-Asp (N) N.D. N.D. N.D. -4.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -4.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -4.1 N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -3.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -3.9 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -3.8 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. -3.8 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. N.D. -3.8 N.D.
phage KLEB20 MOI 0.1 N.D. N.D. N.D. -3.5 N.D.
phage KLEB1 MOI 10 N.D. N.D. N.D. -3.5 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. N.D. N.D. -3.5 N.D.
phage K. M5a1 KLEB23 MOI 1 N.D. N.D. N.D. -3.3 N.D.
nitrogen source L-Arginine (N) N.D. N.D. N.D. -3.0 N.D.
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. -2.9 N.D.
phage KLEB15 MOI 10 N.D. N.D. N.D. -2.9 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. N.D. -2.7 N.D.
phage KLEB15 MOI 1 N.D. N.D. N.D. -2.7 N.D.
stress RCH2_defined_1percent_glucose with Chloride 100 mM and Betaine 100 uM N.D. N.D. N.D. -2.5 N.D.
carbon source D-Fructose (C) N.D. N.D. N.D. -2.5 N.D.
phage KLEB15 MOI 10 N.D. N.D. N.D. -2.4 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL N.D. N.D. N.D. -2.4 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. N.D. N.D. -2.3 N.D.
phage KLEB15 MOI 0.1 N.D. N.D. N.D. -2.2 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. N.D. -2.2 N.D.
stress A22 0.1 mg/ml N.D. N.D. N.D. -2.2 N.D.
phage KLEB15 MOI 0.1 N.D. N.D. N.D. -2.2 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. N.D. N.D. +2.2 N.D.
stress Cobalt chloride 0.5 mM N.D. N.D. N.D. +2.7 N.D.
stress Cobalt chloride 0.5 mM N.D. N.D. N.D. +4.2 N.D.
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