Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS05170	BWI76_RS05175	BWI76_RS05180	BWI76_RS05185	BWI76_RS05190
stress	A22 0.1 mg/ml	N.D.	+0.1	-3.0	-0.1	-0.0
carbon source	D,L-Malic Acid (C)	N.D.	+0.1	-2.8	-0.2	-0.1
stress	A22 0.1 mg/ml	N.D.	+0.0	-2.9	-0.1	+0.1
carbon source	D,L-Malic Acid (C)	N.D.	+0.0	-2.9	+0.0	-0.0
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	N.D.	-0.1	-2.5	+0.2	-0.2
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.3	-1.0	-0.2	-0.0
stress	perchlorate 100 mM	N.D.	+0.0	-1.9	-0.1	-0.3
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	N.D.	-0.1	-1.4	+0.3	-0.9
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	N.D.	-0.1	-1.0	-0.4	-0.5
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	-0.0	-0.8	-0.4	-0.8
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	+0.0	-1.0	-0.3	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	N.D.	-1.2	-0.2	-0.2	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	N.D.	-0.2	-1.0	-0.3	-0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.5	-0.4	+0.2	-0.0
stress	Nickel (II) chloride 1.5 mM	N.D.	-1.0	-0.6	-0.3	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml	N.D.	-0.1	-1.3	+0.1	-0.3
stress	perchlorate 100 mM	N.D.	-0.0	-1.7	+0.1	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-1.8	-0.1	+0.4	-0.1
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	-0.3	-1.1	-0.3	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.1	-0.6	+0.2	-1.1
micoeukaryotes	Tetrahymena sp., Mixed culture-1	N.D.	-0.3	-1.1	-0.4	+0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	N.D.	-1.1	-0.4	+0.2	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	N.D.	-0.9	+0.7	-0.2	-0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	N.D.	-0.7	+0.8	-0.2	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	N.D.	-0.9	+1.0	+0.2	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.0	-0.3	+1.0	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	N.D.	-0.8	+1.0	+0.2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.0	-0.4	+0.7	+0.9
phage	KLEB29 MOI 1	N.D.	+0.3	-0.3	+0.6	+0.8
carbon source	Gly-Glu (C)	N.D.	+0.0	-0.1	+0.6	+1.4