Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS04940	BWI76_RS04945	BWI76_RS04950	BWI76_RS04955	BWI76_RS04960
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.4	+0.2	+0.3	-3.8	-0.2
carbon source	2'-Deoxyinosine 10 mM (C)	+0.2	+0.0	-0.2	-2.4	-0.2
stress	Cobalt chloride 0.5 mM	-0.1	-0.3	-0.3	-1.9	+0.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.3	+0.0	+0.1	-2.1	-0.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.0	+0.2	+0.2	-2.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.0	+0.1	-1.7	-0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.3	-0.1	-0.2	-1.5	-0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.4	-0.5	-0.4	-1.8	+0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	-0.0	-0.8	+0.1	-1.6	+0.3
carbon source	L-Sorbose (C)	-0.5	+0.2	+0.1	-1.7	-0.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.2	-0.3	+0.3	-0.9	-0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.2	+0.0	-0.1	-2.2	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.3	-0.0	-0.2	-2.0	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.3	-0.1	-1.1	+0.6
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.5	-0.1	+0.2	+0.7	+0.2
control	NoPredeControl	-0.0	+0.2	+0.1	-1.4	+0.9
nitrogen source	Cytosine (N)	-0.3	+0.4	+0.3	-1.0	+0.5
phage	K. M5a1 KLEB26 MOI 0.1	-1.2	-0.5	-0.0	+1.2	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.2	-0.1	+0.7	-0.9	+0.6
phage	K. M5a1 KLEB23 MOI 1	+0.5	+0.3	+0.2	-1.2	+0.4
phage	K. M5a1 KLEB23 MOI 10	+0.7	+0.4	+0.4	-1.4	+0.2
phage	K. M5a1 KLEB22 MOI 10	+0.2	+0.3	+0.3	-1.1	+0.7
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	-0.7	-0.4	+0.5	+0.6	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.1	+0.5	+0.1	-1.2	+1.0
phage	KLEB1 MOI 10	+0.4	+0.3	-0.3	+1.2	-0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.3	-0.5	+0.3	+1.6	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.6	-0.0	+1.0	+0.8
phage	KLEB17 MOI 1	+0.3	-0.0	-0.0	+1.4	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2	-0.1	+0.3	+2.2	-0.6
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.4	+0.1	+0.1	+2.1	+0.3