Fitness for 5 genes in Klebsiella michiganensis M5al

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 610 experiments or choose conditions or try the comparative fitness browser

500 ntBWI76_RS04810 and BWI76_RS04815 are separated by 9 nucleotidesBWI76_RS04815 and BWI76_RS04820 overlap by 1 nucleotidesBWI76_RS04820 and BWI76_RS04825 are separated by 347 nucleotidesBWI76_RS04825 and BWI76_RS04830 are separated by 29 nucleotides BWI76_RS04810: BWI76_RS04810 - DNA gyrase inhibitor YacG, at 1,005,822 to 1,006,016 _RS04810 BWI76_RS04815: BWI76_RS04815 - cell division protein ZapD, at 1,006,026 to 1,006,769 _RS04815 BWI76_RS04820: BWI76_RS04820 - dephospho-CoA kinase, at 1,006,769 to 1,007,389 _RS04820 BWI76_RS04825: BWI76_RS04825 - guanosine monophosphate reductase, at 1,007,737 to 1,008,780 _RS04825 BWI76_RS04830: BWI76_RS04830 - type IV pilin biogenesis protein, at 1,008,810 to 1,010,015 _RS04830
Group Condition BWI76_RS04810 BWI76_RS04815 BWI76_RS04820 BWI76_RS04825 BWI76_RS04830
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. -5.0 N.D. +0.1 +0.3
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. -2.1 N.D. -0.1 -0.1
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -1.2 N.D. -0.3 -0.1
phage KLEB1 MOI 10 N.D. -0.8 N.D. -0.3 -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -1.0 N.D. -0.4 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -2.1 N.D. +0.2 +0.4
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. -2.2 N.D. +0.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.4 N.D. -0.1 +0.1
nitrogen source L-tyrosine (N) N.D. -1.2 N.D. -0.3 +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -1.3 N.D. -0.2 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -1.2 N.D. -0.2 +0.2
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL N.D. -1.1 N.D. -0.4 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB N.D. -1.3 N.D. +0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. -0.9 N.D. -0.4 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. -1.2 N.D. +0.1 +0.1
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -1.3 N.D. +0.1 +0.3
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL N.D. -1.7 N.D. +0.3 +0.6
nitrogen source Glucuronamide (N) N.D. +0.6 N.D. -0.7 -0.7
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM N.D. -1.1 N.D. +0.4 -0.0
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -0.9 N.D. -0.1 +0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. -1.0 N.D. -0.0 +0.5
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL N.D. -0.8 N.D. -0.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.9 N.D. -0.8 +0.1
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. -0.6 N.D. +0.4 +0.5
phage KLEB20 MOI 1 N.D. +1.0 N.D. +0.2 -0.4
phage KLEB29 MOI 1 N.D. +0.5 N.D. +0.7 -0.3
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL N.D. +0.5 N.D. -0.3 +0.9
stress Cobalt chloride 0.5 mM N.D. +1.5 N.D. -0.3 +0.3
phage KLEB16 MOI 0.1 N.D. +1.2 N.D. +0.2 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 N.D. +0.6 +0.8
remove
BWI76_RS04810
plot		 remove
BWI76_RS04815
plot		 remove
BWI76_RS04820		 remove
BWI76_RS04825
plot		 remove
BWI76_RS04830
plot