Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS04695	BWI76_RS04700	BWI76_RS04705	BWI76_RS04710	BWI76_RS04715
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-0.0	+0.1	-6.1	-1.4	-4.8
carbon source	succinate (C)	+0.1	+0.1	-5.2	-0.7	-2.9
lb dilute	Dilute LB (1/10)	-0.1	+0.1	-3.8	-0.1	-4.1
lb dilute	Dilute LB (1/10)	-0.0	-0.1	-3.4	-0.6	-3.8
stress	Sisomicin 0.008 mg/ml	-0.0	-0.1	-3.2	-0.5	-3.9
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.0	-0.2	-2.1	-0.6	-4.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-0.3	-2.9	+0.5	-4.2
carbon source	pyruvate (C)	-0.0	+0.1	-4.5	-0.2	-2.2
carbon source	succinate (C)	+0.0	-0.5	-5.1	+0.1	-1.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	-0.1	-2.5	-0.2	-4.0
carbon source	L-Glutamine (C)	-0.1	+0.4	-4.5	-0.3	-1.7
carbon source	D-Alanine (C)	-0.0	+0.4	-5.0	-0.4	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.1	-0.1	-2.9	-0.5	-2.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	+0.7	-3.2	-0.1	-3.4
carbon source	L-Lactate (C)	-0.2	+0.4	-4.4	-0.6	-1.2
carbon source	D-Alanine (C)	+0.1	+0.3	-4.7	-1.0	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	-0.2	+0.0	-2.6	-0.1	-3.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.1	-0.1	-2.5	+0.1	-3.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.4	-3.5	-0.2	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.3	-2.7	+1.0	-3.6
carbon source	D,L-Malic Acid (C)	-0.1	+0.6	-4.1	-0.8	-1.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.4	-2.1	+1.0	-4.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.6	-2.3	+0.1	-4.2
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.1	+0.2	-2.3	-0.3	-3.1
carbon source	L-Lactate (C)	-0.2	+0.1	-4.7	-0.4	+0.4
stress	Cephalothin 0.16 mg/ml	+0.1	+0.2	+0.6	-1.2	-4.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.6	-2.0	-1.1	-2.2
carbon source	L-Sorbose (C)	+0.1	-0.1	-4.4	-0.0	+1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.9	-2.4	+0.7	-2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+0.3	-3.0	+2.9	-1.5