Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS04475	BWI76_RS04480	BWI76_RS04485	BWI76_RS04490	BWI76_RS04495
carbon source	a-Cyclodextrin (C)	-0.2	-0.0	+0.0	-1.5	-1.4
carbon source	a-Cyclodextrin (C)	-0.1	+0.0	-0.1	-1.3	-1.2
phage	K. M5a1 KLEB26 MOI 0.1	-0.6	-0.0	-0.2	-0.8	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.4	-0.0	-0.4	-0.5	+0.2
phage	ER26	-0.3	-0.5	-0.1	+0.2	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.1	-0.1	-0.4	-0.5	+0.3
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+1.3	-0.5	-1.4	-0.0	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.1	-0.3	-0.4	-0.4	+0.4
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.4	-0.0	-0.6	-0.4	+0.0
nitrogen source	Uridine (N)	-0.4	-0.1	-0.4	+0.0	+0.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	-0.1	-0.8	+0.3	+0.1
phage	ER72	-0.4	+0.3	-0.2	-0.2	+0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.1	+0.4	-0.7	+0.3	+0.2
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.2	+0.1	-0.5	-0.2	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.4	+0.2	-0.7	+0.2	+0.2
stress	Paraquat dichloride 0.1 mg/ml	+0.5	-0.4	+0.1	-0.2	+0.2
nitrogen source	Uridine (N)	+0.3	+0.4	-0.6	+0.2	-0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	+0.3	-0.5	-0.1	+0.5
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.1	-0.1	-0.6	+0.0	+1.0
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	+0.1	-0.1	-0.3	+0.1	+0.8
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.4	+0.2	-0.5	+0.0	+0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.5	+0.2	-0.5	-0.1	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.5	-0.2	-0.2	-0.2	+0.5
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.1	-0.3	-0.2	+0.1	+0.8
nitrogen source	nitrate (N)	+0.4	+0.6	-0.4	+0.3	-0.2
phage	MM23	+0.4	+0.4	+0.4	-0.2	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.4	+0.5	+0.5	-0.2
stress	Paraquat dichloride 0.1 mg/ml	+1.0	-0.0	+0.2	+0.2	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4	+0.1	+0.1	+0.0	+1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	+0.2	+0.4	+0.2	-0.1