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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS04470 and BWI76_RS04475 are separated by 138 nucleotides
BWI76_RS04475 and BWI76_RS04480 are separated by 103 nucleotides
BWI76_RS04480 and BWI76_RS04485 are separated by 261 nucleotides
BWI76_RS04485 and BWI76_RS04490 are separated by 166 nucleotides
BWI76_RS04470: BWI76_RS04470 - carbamoyl phosphate synthase large subunit, at 923,713 to 926,937
_RS04470
BWI76_RS04475: BWI76_RS04475 - ROK family protein, at 927,076 to 927,960
_RS04475
BWI76_RS04480: BWI76_RS04480 - YgdI/YgdR family lipoprotein, at 928,064 to 928,297
_RS04480
BWI76_RS04485: BWI76_RS04485 - hypothetical protein, at 928,559 to 930,115
_RS04485
BWI76_RS04490: BWI76_RS04490 - glutathione-regulated potassium-efflux system ancillary protein KefF, at 930,282 to 930,815
_RS04490
Group
Condition
BWI76
_RS04470
BWI76
_RS04475
BWI76
_RS04480
BWI76
_RS04485
BWI76
_RS04490
supernatant control
Vogels_fungal_media; pH 5.5
-10.6
-0.2
+0.0
+0.3
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
-10.6
-0.1
+0.1
-0.0
-0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
-10.7
-0.1
+0.2
-0.1
+0.1
supernatant control
Vogels_fungal_media; pH 5.5
-10.6
+0.2
-0.2
+0.1
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-10.4
+0.3
-0.1
-0.1
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
-10.6
+0.2
-0.1
+0.1
+0.1
phage
MM5
-9.5
-0.3
+0.1
+0.0
-0.3
phage
MM4
-9.6
-0.3
+0.1
+0.1
-0.0
phage
ER72
-9.2
-0.4
+0.3
-0.2
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
-9.6
-0.2
+0.2
+0.0
-0.1
phage
MM1.1
-9.5
+0.1
+0.1
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-9.6
-0.3
+0.1
+0.4
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-8.9
-0.1
-0.0
-0.2
-0.4
phage
KP4_E4_R2_1
-8.6
-0.4
-0.4
+0.1
-0.2
phage
MM16
-9.1
-0.3
+0.2
-0.1
-0.2
phage
MM8
-9.1
+0.0
+0.0
+0.0
-0.3
phage
KP19_E3_R2_1
-8.9
-0.3
+0.2
+0.0
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-9.4
-0.1
-0.0
+0.3
+0.0
supernatant control
Vogels_fungal_media 0.1X
-9.7
+0.4
+0.2
-0.1
+0.1
phage
KP2_E3_R2_1
-9.0
-0.1
+0.1
+0.1
-0.3
phage
MM5
-9.1
-0.2
+0.4
+0.0
-0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB
-9.5
+0.1
+0.3
+0.2
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
-9.2
-0.1
+0.3
+0.1
-0.0
supernatant control
Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
-9.2
+0.1
+0.2
-0.0
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-9.1
-0.2
+0.4
+0.2
-0.0
phage
MM1.1
-9.0
-0.2
+0.3
+0.2
-0.1
phage
KP19_E3_R2_1
-8.4
-0.3
+0.4
-0.1
-0.2
phage
MM4
-8.7
-0.4
+0.2
+0.2
+0.1
phage
Roth35v2
-8.8
-0.2
+0.4
+0.3
-0.3
phage
Roth35v2
-8.4
-0.2
+0.2
+0.7
+0.3
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