Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS04340 and BWI76_RS04345 overlap by 1 nucleotidesBWI76_RS04345 and BWI76_RS04350 are separated by 54 nucleotidesBWI76_RS04350 and BWI76_RS04355 are separated by 1 nucleotidesBWI76_RS04355 and BWI76_RS04360 are separated by 65 nucleotides BWI76_RS04340: BWI76_RS04340 - isoleucine--tRNA ligase, at 893,048 to 895,864 _RS04340 BWI76_RS04345: BWI76_RS04345 - signal peptidase II, at 895,864 to 896,364 _RS04345 BWI76_RS04350: BWI76_RS04350 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 896,419 to 896,868 _RS04350 BWI76_RS04355: BWI76_RS04355 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 896,870 to 897,820 _RS04355 BWI76_RS04360: BWI76_RS04360 - ribonucleoside hydrolase RihC, at 897,886 to 898,800 _RS04360
Group Condition BWI76_RS04340 BWI76_RS04345 BWI76_RS04350 BWI76_RS04355 BWI76_RS04360
phage KLEB20 MOI 0.1 N.D. N.D. N.D. N.D. -1.0
carbon source D-Xylose (C) N.D. N.D. N.D. N.D. -1.0
nitrogen source L-Tryptophan (N) N.D. N.D. N.D. N.D. -0.8
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. -0.7
phage KLEB1 MOI 10 N.D. N.D. N.D. N.D. -0.7
phage KLEB15 MOI 0.1 N.D. N.D. N.D. N.D. -0.7
nitrogen source Thymidine (N) N.D. N.D. N.D. N.D. -0.6
mixed community LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. N.D. -0.6
ecofab LB in EcoFAB_10mL EcoFab with sand N.D. N.D. N.D. N.D. +0.6
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. N.D. N.D. N.D. +0.6
carbon source 2'-Deoxycytidine 5 mM (C) N.D. N.D. N.D. N.D. +0.6
stress Cephalothin 0.16 mg/ml N.D. N.D. N.D. N.D. +0.6
phage KLEB29 MOI 1 N.D. N.D. N.D. N.D. +0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. N.D. N.D. +0.7
stress nitrite 40 mM N.D. N.D. N.D. N.D. +0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. N.D. +0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM N.D. N.D. N.D. N.D. +0.7
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. N.D. N.D. +0.7
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. N.D. N.D. N.D. +0.7
phage K. M5a1 KLEB23 MOI 1 N.D. N.D. N.D. N.D. +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. +0.9
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. N.D. N.D. N.D. +0.9
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. N.D. N.D. N.D. +1.0
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. N.D. N.D. N.D. +1.2
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. N.D. N.D. N.D. +1.3
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. N.D. N.D. N.D. +1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. N.D. +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. N.D. N.D. +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. +1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +1.7
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