Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS04210	BWI76_RS04215	BWI76_RS04220	BWI76_RS04225	BWI76_RS04230
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.5	-0.6	-0.1	-0.2	N.D.
nitrogen source	Uridine (N)	-0.6	+0.2	-0.2	-0.4	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-1.5	+0.2	+0.0	+0.5	N.D.
phage	KLEB31 MOI 1	-0.5	-0.3	+0.5	-0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	+0.5	-0.1	-0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.3	-0.3	+0.5	N.D.
phage	KLEB17 MOI 0.1	+0.5	-0.5	-0.2	-0.3	N.D.
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.8	+0.3	-0.2	+0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	-0.8	-0.3	+0.7	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.8	+0.3	-0.1	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-0.3	+0.4	+0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	+0.6	+0.1	-0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7	-0.3	+0.1	-0.2	N.D.
phage	K. M5a1 KLEB23 MOI 1	+0.9	+0.1	-0.2	-0.4	N.D.
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.5	-0.5	+0.0	+0.3	N.D.
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.7	+0.1	+0.1	-0.5	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	-0.2	+0.0	+0.9	N.D.
nitrogen source	L-tyrosine (N)	+0.2	+0.8	-0.3	+0.2	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.7	-0.0	-0.1	+0.5	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.7	+0.2	+0.6	N.D.
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	+0.9	+0.2	+0.1	-0.1	N.D.
stress	Paraquat dichloride 0.1 mg/ml	+0.6	-0.3	+0.2	+0.7	N.D.
phage	K. M5a1 KLEB23 MOI 10	+0.8	+0.3	+0.1	+0.2	N.D.
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+0.2	+1.0	+0.0	+0.2	N.D.
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.2	+0.4	+0.2	+0.6	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.2	+0.5	+0.2	+0.5	N.D.
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.8	+0.2	+0.0	+0.3	N.D.
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.9	+0.3	+0.1	+0.2	N.D.
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+1.0	-0.1	+0.3	+0.6	N.D.
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.4	+0.7	+0.2	+1.0	N.D.