Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS04160 and BWI76_RS04165 are separated by 9 nucleotidesBWI76_RS04165 and BWI76_RS04170 are separated by 21 nucleotidesBWI76_RS04170 and BWI76_RS04175 are separated by 98 nucleotidesBWI76_RS04175 and BWI76_RS04180 overlap by 60 nucleotides BWI76_RS04160: BWI76_RS04160 - phosphoserine phosphatase, at 855,672 to 856,643 _RS04160 BWI76_RS04165: BWI76_RS04165 - DNA repair protein RadA, at 856,653 to 858,035 _RS04165 BWI76_RS04170: BWI76_RS04170 - trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR, at 858,057 to 859,289 _RS04170 BWI76_RS04175: BWI76_RS04175 - energy-dependent translational throttle protein EttA, at 859,388 to 861,055 _RS04175 BWI76_RS04180: BWI76_RS04180 - hypothetical protein, at 860,996 to 861,203 _RS04180
Group Condition BWI76_RS04160 BWI76_RS04165 BWI76_RS04170 BWI76_RS04175 BWI76_RS04180
nitrogen source D-Alanine (N) -8.8 +0.6 -0.4 -0.7 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -9.6 +0.3 -0.2 +0.2 +0.2
carbon source acetate (C) -8.5 +0.0 +0.1 -0.4 -0.2
carbon source succinate (C) -8.6 -0.5 +0.1 +0.3 -0.1
carbon source D-Lactate (C) -7.7 -0.5 +0.2 -0.6 -0.3
carbon source D-Alanine (C) -7.4 -0.1 -0.4 -0.4 -0.5
nitrogen source Uridine (N) -6.9 -0.7 +0.0 -1.1 -0.0
carbon source D-Gluconic Acid (C) -8.5 +0.1 -0.1 +0.1 -0.2
nitrogen source Cytidine (N) -9.1 +0.6 -0.1 +0.4 -0.1
nitrogen source Thymidine (N) -9.1 +0.5 +0.1 +0.2 -0.1
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -8.1 +0.0 +0.1 +0.2 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM -6.8 +0.2 -0.4 -0.1 -0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -7.1 +0.3 -0.3 -0.1 -0.5
nitrogen source L-Tryptophan (N) -9.1 +0.1 +0.2 +0.7 +0.2
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -8.2 -0.1 +0.2 +0.1 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM -8.1 +0.1 +0.0 +0.1 +0.3
nitrogen source N-Acetyl-D-glucosamine (N) -8.1 +0.1 +0.4 +0.6 -0.3
nitrogen source L-Asparagine (N) -7.5 -0.4 +0.2 +0.3 +0.2
carbon source 2-Deoxyadenosine 4 mM (C) -7.5 +0.2 +0.2 +0.0 -0.2
nitrogen source L-Histidine (N) -7.8 +0.0 +0.2 +0.4 +0.0
stress RCH2_defined_1percent_glucose with Chloride 400 mM -6.4 -0.1 -0.7 -0.5 +0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -8.0 +0.6 +0.1 +0.1 +0.3
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.25x -7.7 +0.4 +0.3 -0.1 +0.2
carbon source succinate (C) -7.3 +0.3 -0.0 +0.4 -0.4
carbon source D-Sorbitol (C) -7.6 +0.3 -0.1 +0.5 +0.1
carbon source Inosine (C) -7.5 -0.1 +0.1 +0.8 -0.0
nitrogen source L-Arginine (N) -6.9 +0.4 -0.0 +0.5 -0.4
nitrogen source Cytosine (N) -7.1 +0.2 +0.2 +0.5 -0.1
nitrogen source Ammonium chloride (N) -7.2 +0.2 +0.1 +0.4 +0.2
nitrogen source L-Isoleucine (N) -7.1 +0.3 +0.1 +0.4 +0.1
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