Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS03950	BWI76_RS03955	BWI76_RS03960	BWI76_RS03965	BWI76_RS03970
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	-0.0	-0.1	-0.2	-0.8	-0.7
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.0	-0.3	-0.5	-0.8	-0.1
phage	KLEB17 MOI 1	-0.1	-0.5	-0.4	-0.0	-0.5
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.2	-0.1	-0.2	-1.1	+0.0
phage	KLEB20 MOI 1	-0.1	-0.1	-0.2	-0.5	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	+0.1	-0.5	-0.6	-0.2
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.3	-0.1	-0.3	-1.0	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	+0.2	-0.4	-1.0
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	+0.1	+0.1	-0.1	-0.5	-0.6
nitrogen source	L-Lysine (N)	-0.2	+0.2	+0.1	-0.5	-0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	+0.1	-0.3	-0.9	+0.4
carbon source	RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x	+0.2	+0.1	-0.2	-0.8	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	-0.2	-0.3	-0.7	+0.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	-0.0	-0.0	-0.9	-0.2
carbon source	Gly-Glu (C)	-0.1	-0.2	+0.4	-0.6	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	-0.0	-0.5	-0.4	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.3	+0.1	-0.2	-0.3	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.5	-0.3	-0.1	-0.2	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.2	+0.1	-0.0	-0.6	+0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.4	-0.1	-0.4	-0.4	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	+0.0	-0.2	-0.6	+0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	-0.3	-0.1	+0.3	-0.4	+0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.1	-0.4	-0.4	+0.3	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	-0.1	-0.1	-0.3	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-0.2	-0.0	-0.1	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	+0.1	+0.4	+0.2	-0.4
phage	KLEB31 MOI 1	-0.3	-0.1	+0.1	+0.6	+0.6
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.2	-0.1	+0.2	+1.0
phage	KLEB1 MOI 0.1	+0.1	+0.0	+0.2	+0.4	+0.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.2	-0.2	+0.2	+0.1	+1.0